Transcription Factor
ref-1
Cell Line
whole organism
Description
ChIP-seq on transgenic worms expressing ref-1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
ENCODE Link
ENCSR915ANO

Files (26)

File Type Size Actions
REF1IP1_072_121_S99_L002_R1_001.fastq.gz
fastq
479 MB
REF1IP1_072_121_S99_L002_R2_001.fastq.gz
fastq
498 MB
REF1IP2_060_133_S100_L002_R1_001.fastq.gz
fastq
560 MB
REF1IP2_060_133_S100_L002_R2_001.fastq.gz
fastq
585 MB
REF1IP1_072_121_S99_L002_R1_001.bam
bam
752 MB
REF1IP2_060_133_S100_L002_R1_001.bam
bam
863 MB
REF1IP1_072_121_S99_L002_R1_001.nodup.bam
bam
572 MB
REF1IP2_060_133_S100_L002_R1_001.nodup.bam
bam
645 MB
REF1IP2_060_133_S100_L002_R1_001.nodup_x_ctl_for_rep2.fc.signal.bigwig
bigWig
241 MB
rep1-pr1_vs_rep1-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2 MB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
6.53 KB
rep2-pr1_vs_rep2-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.97 MB
REF1IP1_072_121_S99_L002_R1_001.nodup_x_ctl_for_rep1.pval.signal.bigwig
bigWig
200 MB
REF1IP1_072_121_S99_L002_R1_001.nodup_x_ctl_for_rep1.fc.signal.bigwig
bigWig
231 MB
REF1IP2_060_133_S100_L002_R1_001.nodup_x_ctl_for_rep2.pval.signal.bigwig
bigWig
202 MB
pooled-pr1_vs_pooled-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.89 MB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
12.9 KB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
66.5 KB
rep.pooled_x_REF1inp1_082_111_S114_L002_R1_001.nodup.pval.signal.bigwig
bigWig
283 MB
rep.pooled_x_REF1inp1_082_111_S114_L002_R1_001.nodup.fc.signal.bigwig
bigWig
293 MB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
7.65 KB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
12.6 KB
rep1_vs_rep2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.08 MB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
48.5 KB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
50.2 KB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
65.7 KB