Transcription Factor
CTCF
Cell Line
foreskin keratinocyte
Description
CTCF ChIP-seq on primary keratinocytes in day 0 of differentiation
ENCODE Link
ENCSR817HTJ

Files (66)

File Type Size Actions
ENCFF303QKQ.crop_101-2bp.bam
bam
4.73 GB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.59 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
771 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.24 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.34 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.58 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.15 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.47 MB
primary_keratinocyte-d0.GGR.Stanford_Snyder.ChIP-seq_CTCF.b2.t1.CGATGT.1.fastq.gz
fastq
2.58 GB
primary_keratinocyte-d0.GGR.Stanford_Snyder.ChIP-seq_CTCF.b1.t1.ATCACG.1.fastq.gz
fastq
2.14 GB
primary_keratinocyte-d0.GGR.Stanford_Snyder.ChIP-seq_CTCF.b1.t1.ATCACG.2.fastq.gz
fastq
2.17 GB
primary_keratinocyte-d0.GGR.Stanford_Snyder.ChIP-seq_CTCF.b2.t1.CGATGT.2.fastq.gz
fastq
2.7 GB
ENCFF303QKQENCFF239KLD.raw.srt.bam
bam
4.66 GB
ENCFF303QKQENCFF239KLD.raw.srt.bam
bam
4.66 GB
ENCFF303QKQENCFF239KLD.raw.srt.filt.srt.nodup.bam
bam
3.57 GB
ENCFF912XOKENCFF933JZR.raw.srt.bam
bam
3.9 GB
ENCFF912XOKENCFF933JZR.raw.srt.bam
bam
3.91 GB
ENCFF912XOKENCFF933JZR.raw.srt.filt.srt.nodup.bam
bam
3.07 GB
ENCFF912XOKENCFF933JZR.raw.srt.filt.srt.nodup.bam
bam
3.07 GB
ENCFF303QKQENCFF239KLD.raw.srt.filt.srt.nodup.bam
bam
3.57 GB
r1.pvalue_signal.bw
bigWig
1.04 GB
r2.pvalue_signal.bw
bigWig
1.15 GB
pool.pvalue_signal.bw
bigWig
1.86 GB
r1.fc_signal.bw
bigWig
1.03 GB
r2.fc_signal.bw
bigWig
1.16 GB
pool.fc_signal.bw
bigWig
2.05 GB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.81 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
6.19 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
6.57 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11.3 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
1.11 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
2.22 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.12 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2.24 MB
r1.pvalue_signal.bw
bigWig
1.15 GB
pool.pvalue_signal.bw
bigWig
1.91 GB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11.3 MB
pool.fc_signal.bw
bigWig
2.05 GB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
1.11 MB
r2.pvalue_signal.bw
bigWig
1.11 GB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
2.22 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
6.61 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.17 MB
r1.fc_signal.bw
bigWig
1.02 GB
r2.fc_signal.bw
bigWig
1.16 GB
R1.regionPeak.gz
bed narrowPeak
5.81 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
6.13 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2.31 MB
ENCFF912XOK.crop_101-2bp.bam
bam
3.96 GB
ENCFF912XOK.crop_101-2bp.nodup.bam
bam
3.04 GB
ENCFF303QKQ.crop_101-2bp.nodup.bam
bam
3.54 GB
ENCFF912XOK.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
1.68 GB
ENCFF912XOK.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
1.41 GB
ENCFF303QKQ.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
1.58 GB
ENCFF303QKQ.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
1.59 GB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
1.92 GB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
2.08 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.78 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
926 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.01 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.21 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
2.27 MB