ENCODE Experiment ENCSR768DOX

Transcription Factor
SMC3
Cell Line
A549
Description
SMC3 ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 1 hours.
ENCODE Link
ENCSR768DOX

Files (50)

File Type Size Actions
A549.SMC3.dex.01h00m.rep1.fastq.gz
fastq
578 MB
A549.SMC3.dex.01h00m.rep2.fastq.gz
fastq
572 MB
A549.SMC3.dex.01h00m.rep3.fastq.gz
fastq
755 MB
A549.SMC3.dex.01h00m.rep1.dedup.masked.sorted.bam
bam
630 MB
A549.SMC3.dex.01h00m.rep3.dedup.masked.sorted.bam
bam
808 MB
A549.SMC3.dex.01h00m.rep2.dedup.masked.sorted.bam
bam
611 MB
A549.SMC3.dex.01h00m.rep1.dedup.masked.sorted_peaks.trunked_scores.narrowPeak.gz
bed narrowPeak
874 KB
A549.SMC3.dex.01h00m.rep2.dedup.masked.sorted_peaks.trunked_scores.narrowPeak.gz
bed narrowPeak
1.05 MB
A549.SMC3.dex.01h00m.rep3.dedup.masked.sorted_peaks.trunked_scores.narrowPeak.gz
bed narrowPeak
1.25 MB
A549.SMC3.dex.01h00m.rep1.dedup.masked.sorted_peaks.trunked_scores.bb
bigBed narrowPeak
1.63 MB
A549.SMC3.dex.01h00m.rep2.dedup.masked.sorted_peaks.trunked_scores.bb
bigBed narrowPeak
2.3 MB
A549.SMC3.dex.01h00m.rep3.dedup.masked.sorted_peaks.trunked_scores.bb
bigBed narrowPeak
2.59 MB
A549.SMC3.dex.01h00m.rep3.dedup.masked.sorted.rpkm.bw
bigWig
197 MB
A549.SMC3.dex.01h00m.rep1.dedup.masked.sorted.rpkm.bw
bigWig
169 MB
A549.SMC3.dex.01h00m.rep2.dedup.masked.sorted.rpkm.bw
bigWig
149 MB
ENCFF421IBE.crop_51-2bp.srt.bam
bam
780 MB
ENCFF546HLW.crop_51-2bp.srt.bam
bam
777 MB
ENCFF024WTF.crop_51-2bp.srt.bam
bam
1010 MB
ENCFF421IBE.crop_51-2bp.srt.nodup.bam
bam
656 MB
ENCFF546HLW.crop_51-2bp.srt.nodup.bam
bam
625 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
879 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.08 MB
ENCFF024WTF.crop_51-2bp.srt.nodup.bam
bam
830 MB
ENCFF546HLW.crop_51-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
825 MB
ENCFF024WTF.crop_51-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
738 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.35 MB
rep3-pr1_vs_rep3-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.74 MB
rep3-pr1_vs_rep3-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
555 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.28 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.43 MB
rep1_vs_rep3.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
605 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
584 KB
rep1_vs_rep3.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.04 MB
ENCFF421IBE.crop_51-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
886 MB
ENCFF421IBE.crop_51-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
640 MB
ENCFF546HLW.crop_51-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
609 MB
ENCFF024WTF.crop_51-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
797 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
1.22 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.87 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
450 KB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
1.14 GB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
476 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
633 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
807 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.01 MB
rep1_vs_rep3.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.71 MB
rep3-pr1_vs_rep3-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
948 KB
rep2_vs_rep3.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.86 MB
rep2_vs_rep3.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
615 KB
rep2_vs_rep3.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.05 MB