Transcription Factor
SYNCRIP
Cell Line
HepG2
Description
SYNCRIP ChIP-seq on HepG2
ENCODE Link
ENCSR625ORP

Files (64)

File Type Size Actions
HNRNPQ_ChIP_rep1_HepG2_batch3_combined.fastq.gz
fastq
632 MB
HNRNPQ_ChIP_rep2_HepG2_batch3_combined.fastq.gz
fastq
778 MB
ENCFF462CQQ.raw.srt.bam
bam
811 MB
ENCFF400OAC.raw.srt.bam
bam
1000 MB
ENCFF462CQQ.raw.srt.filt.nodup.srt.bam
bam
436 MB
ENCFF400OAC.raw.srt.filt.nodup.srt.bam
bam
561 MB
r1.pvalue_signal.bw
bigWig
504 MB
r2.pvalue_signal.bw
bigWig
601 MB
pool.pvalue_signal.bw
bigWig
1020 MB
r1.fc_signal.bw
bigWig
304 MB
pool.fc_signal.bw
bigWig
810 MB
r2.fc_signal.bw
bigWig
364 MB
ENCFF400OAC.raw.srt.bam
bam
1010 MB
ENCFF462CQQ.raw.srt.bam
bam
815 MB
ENCFF462CQQ.raw.srt.filt.nodup.srt.bam
bam
436 MB
ENCFF400OAC.raw.srt.filt.nodup.srt.bam
bam
560 MB
r2.pvalue_signal.bw
bigWig
551 MB
r1.pvalue_signal.bw
bigWig
508 MB
pool.pvalue_signal.bw
bigWig
915 MB
r1.fc_signal.bw
bigWig
304 MB
r2.fc_signal.bw
bigWig
360 MB
pool.fc_signal.bw
bigWig
810 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
3.48 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
3.9 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
9.99 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.5 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
8.69 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.9 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
606 Bytes
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
59 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
969 Bytes
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
72.9 KB
PL.regionPeak.gz
bed narrowPeak
5.66 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
9.04 MB
R1.regionPeak.gz
bed narrowPeak
3.7 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
3.9 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.9 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
9.99 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
73.1 KB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
1011 Bytes
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.08 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
73.3 KB
ENCFF400OAC.crop_40-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
537 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
155 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
711 Bytes
ENCFF462CQQ.crop_40-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
455 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
963 MB
ENCFF462CQQ.crop_40-2bp.srt.bam
bam
804 MB
ENCFF400OAC.crop_40-2bp.srt.bam
bam
993 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
820 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
633 Bytes
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
13.8 KB
ENCFF462CQQ.crop_40-2bp.srt.nodup.bam
bam
457 MB
ENCFF400OAC.crop_40-2bp.srt.nodup.bam
bam
588 MB
ENCFF462CQQ.crop_40-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
841 MB
ENCFF400OAC.crop_40-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
968 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
130 Bytes
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
14.7 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
291 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.29 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
142 Bytes
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.6 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
58.7 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
19.8 KB