ENCODE Experiment ENCSR414CQB

Transcription Factor
CTCF
Cell Line
A549
Description
CTCF ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 12 hours.
ENCODE Link
ENCSR414CQB

Files (50)

File Type Size Actions
CTCF.t12_rep2.fastq.gz
fastq
628 MB
CTCF.t12_rep1.fastq.gz
fastq
716 MB
CTCF.t12_rep3.fastq.gz
fastq
776 MB
CTCF.t12_rep1.dedup_filtered.bam
bam
755 MB
CTCF.t12_rep3.dedup_filtered.bam
bam
829 MB
CTCF.t12_rep2.dedup_filtered.bam
bam
647 MB
CTCF.t12_rep3_peaks.score_rescaled.narrowPeak.gz
bed narrowPeak
694 KB
CTCF.t12_rep1_peaks.score_rescaled.narrowPeak.gz
bed narrowPeak
694 KB
CTCF.t12_rep2_peaks.score_rescaled.narrowPeak.gz
bed narrowPeak
793 KB
CTCF.t12_rep2.fragment_extended.bw
bigWig
150 MB
CTCF.t12_rep3.fragment_extended.bw
bigWig
198 MB
CTCF.t12_rep1.fragment_extended.bw
bigWig
175 MB
CTCF.t12_rep1_peaks.score_rescaled.narrowPeak.bigBed
bigBed narrowPeak
2.27 MB
CTCF.t12_rep2_peaks.score_rescaled.narrowPeak.bigBed
bigBed narrowPeak
2.53 MB
CTCF.t12_rep3_peaks.score_rescaled.narrowPeak.bigBed
bigBed narrowPeak
2.25 MB
ENCFF016IVG.crop_51-2bp.bam
bam
949 MB
ENCFF984HWD.crop_51-2bp.bam
bam
824 MB
ENCFF456HVM.crop_51-2bp.bam
bam
1020 MB
ENCFF016IVG.crop_51-2bp.nodup.bam
bam
798 MB
ENCFF984HWD.crop_51-2bp.nodup.bam
bam
685 MB
ENCFF456HVM.crop_51-2bp.nodup.bam
bam
875 MB
ENCFF016IVG.crop_51-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
947 MB
ENCFF016IVG.crop_51-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
730 MB
ENCFF984HWD.crop_51-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
950 MB
ENCFF984HWD.crop_51-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
635 MB
ENCFF456HVM.crop_51-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
998 MB
ENCFF456HVM.crop_51-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
793 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
627 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
716 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.04 MB
rep3-pr1_vs_rep3-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.03 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
1.09 GB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
1.31 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.96 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.11 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.19 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.17 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.98 MB
rep2_vs_rep3.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.19 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.01 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
568 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.91 MB
rep2_vs_rep3.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
700 KB
rep1_vs_rep3.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.16 MB
rep3-pr1_vs_rep3-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.47 MB
rep3-pr1_vs_rep3-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
615 KB
rep2_vs_rep3.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.16 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
700 KB
rep1_vs_rep3.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.52 MB
rep1_vs_rep3.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
695 KB