Transcription Factor
php-3
Cell Line
whole organism
Description
ChIP-seq on transgenic worms expressing php-3-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
ENCODE Link
ENCSR404VKP

Files (26)

File Type Size Actions
PHP3IP1_144_049_S45_L001_R1_001.fastq.gz
fastq
653 MB
PHP3IP1_144_049_S45_L001_R2_001.fastq.gz
fastq
653 MB
PHP3IP2_132_061_S46_L001_R1_001.fastq.gz
fastq
715 MB
PHP3IP2_132_061_S46_L001_R2_001.fastq.gz
fastq
715 MB
PHP3IP2_132_061_S46_L001_R1_001.nodup_x_ctl_for_rep2.fc.signal.bigwig
bigWig
287 MB
pooled-pr1_vs_pooled-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.29 MB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
62.3 KB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
154 KB
PHP3IP1_144_049_S45_L001_R1_001.bam
bam
945 MB
PHP3IP1_144_049_S45_L001_R1_001.nodup_x_ctl_for_rep1.pval.signal.bigwig
bigWig
258 MB
PHP3IP2_132_061_S46_L001_R1_001.bam
bam
1 GB
PHP3IP1_144_049_S45_L001_R1_001.nodup.bam
bam
782 MB
PHP3IP2_132_061_S46_L001_R1_001.nodup_x_ctl_for_rep2.pval.signal.bigwig
bigWig
247 MB
PHP3IP1_144_049_S45_L001_R1_001.nodup_x_ctl_for_rep1.fc.signal.bigwig
bigWig
281 MB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
155 KB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
35.7 KB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
63.4 KB
PHP3IP2_132_061_S46_L001_R1_001.nodup.bam
bam
841 MB
rep.pooled_x_PHP3inp_167_026_S51_L001_R1_001.nodup.pval.signal.bigwig
bigWig
281 MB
rep.pooled_x_PHP3inp_167_026_S51_L001_R1_001.nodup.fc.signal.bigwig
bigWig
348 MB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
30.8 KB
rep2-pr1_vs_rep2-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.56 MB
rep1-pr1_vs_rep1-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.15 MB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
96.8 KB
rep1_vs_rep2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.3 MB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
90.7 KB