Transcription Factor
sox-2
Cell Line
whole organism
Description
ChIP-seq on transgenic worms expressing sox-2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
ENCODE Link
ENCSR046EEF

Files (26)

File Type Size Actions
SOX2IP2_018_175_S155_L002_R2_001.fastq.gz
fastq
278 MB
SOX2IP1_030_163_S154_L002_R1_001.fastq.gz
fastq
282 MB
SOX2IP1_030_163_S154_L002_R2_001.fastq.gz
fastq
287 MB
SOX2IP2_018_175_S155_L002_R1_001.fastq.gz
fastq
276 MB
rep2-pr1_vs_rep2-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.08 MB
pooled-pr1_vs_pooled-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
392 KB
SOX2IP1_030_163_S154_L002_R1_001.nodup.bam
bam
342 MB
SOX2IP1_030_163_S154_L002_R1_001.nodup_x_ctl_for_rep1.fc.signal.bigwig
bigWig
180 MB
SOX2IP2_018_175_S155_L002_R1_001.nodup_x_ctl_for_rep2.pval.signal.bigwig
bigWig
156 MB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
10.6 KB
rep.pooled_x_SOX2inp1_029_164_S162_L002_R1_001.nodup.pval.signal.bigwig
bigWig
186 MB
SOX2IP1_030_163_S154_L002_R1_001.bam
bam
429 MB
SOX2IP2_018_175_S155_L002_R1_001.bam
bam
424 MB
SOX2IP2_018_175_S155_L002_R1_001.nodup.bam
bam
338 MB
SOX2IP1_030_163_S154_L002_R1_001.nodup_x_ctl_for_rep1.pval.signal.bigwig
bigWig
167 MB
SOX2IP2_018_175_S155_L002_R1_001.nodup_x_ctl_for_rep2.fc.signal.bigwig
bigWig
179 MB
rep.pooled_x_SOX2inp1_029_164_S162_L002_R1_001.nodup.fc.signal.bigwig
bigWig
222 MB
rep1-pr1_vs_rep1-pr2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.05 MB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
11.2 KB
rep1_vs_rep2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
53.7 KB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
8.97 KB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.gz
bed narrowPeak
10.7 KB
rep1_vs_rep2.idr0.01.unthresholded-peaks.txt.gz
bed idr_ranked_peak
395 KB
rep2-pr1_vs_rep2-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
53.8 KB
rep1-pr1_vs_rep1-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
51.5 KB
pooled-pr1_vs_pooled-pr2.idr0.01.bfilt.regionPeak.bb
bigBed narrowPeak
54.3 KB