Transcription Factor
CTCF
Cell Line
foreskin keratinocyte
Description
CTCF ChIP-seq on primary keratinocytes in day 3 of differentiation
ENCODE Link
ENCSR036EGV

Files (66)

File Type Size Actions
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
2.03 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.98 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.33 MB
primary_keratinocyte-d3.GGR.Stanford_Snyder.ChIP-seq_CTCF.b2.t1.TGACCA.1.fastq.gz
fastq
2.56 GB
primary_keratinocyte-d3.GGR.Stanford_Snyder.ChIP-seq_CTCF.b1.t1.TTAGGC.1.fastq.gz
fastq
2.2 GB
primary_keratinocyte-d3.GGR.Stanford_Snyder.ChIP-seq_CTCF.b1.t1.TTAGGC.2.fastq.gz
fastq
2.32 GB
primary_keratinocyte-d3.GGR.Stanford_Snyder.ChIP-seq_CTCF.b2.t1.TGACCA.2.fastq.gz
fastq
2.67 GB
ENCFF799EIXENCFF298TOW.raw.srt.bam
bam
4.03 GB
ENCFF116KHOENCFF536FQC.raw.srt.bam
bam
4.72 GB
ENCFF799EIXENCFF298TOW.raw.srt.filt.srt.nodup.bam
bam
3.08 GB
ENCFF799EIXENCFF298TOW.raw.srt.filt.srt.nodup.bam
bam
3.08 GB
ENCFF116KHOENCFF536FQC.raw.srt.filt.srt.nodup.bam
bam
3.7 GB
ENCFF799EIXENCFF298TOW.raw.srt.bam
bam
4.03 GB
ENCFF116KHOENCFF536FQC.raw.srt.filt.srt.nodup.bam
bam
3.7 GB
ENCFF116KHOENCFF536FQC.raw.srt.bam
bam
4.72 GB
r1.pvalue_signal.bw
bigWig
1.16 GB
r2.pvalue_signal.bw
bigWig
1.12 GB
pool.pvalue_signal.bw
bigWig
1.55 GB
r1.fc_signal.bw
bigWig
983 MB
r2.fc_signal.bw
bigWig
1.22 GB
pool.fc_signal.bw
bigWig
2.02 GB
R1.fixcoord.regionPeak.gz
bed narrowPeak
6.02 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
6.26 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
6.69 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
13.4 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
13.4 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
1020 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.97 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.02 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2.02 MB
pool.pvalue_signal.bw
bigWig
1.7 GB
r2.fc_signal.bw
bigWig
1.21 GB
pool.fc_signal.bw
bigWig
2.03 GB
PL.regionPeak.gz
bed narrowPeak
6.66 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.01 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2 MB
r1.pvalue_signal.bw
bigWig
1000 MB
r2.pvalue_signal.bw
bigWig
1.11 GB
r1.fc_signal.bw
bigWig
993 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.97 MB
R2.regionPeak.gz
bed narrowPeak
6.22 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
13.3 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
13.3 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
1010 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.96 MB
ENCFF799EIX.crop_101-2bp.bam
bam
4.09 GB
ENCFF116KHO.crop_101-2bp.bam
bam
4.78 GB
ENCFF799EIX.crop_101-2bp.nodup.bam
bam
3.06 GB
ENCFF116KHO.crop_101-2bp.nodup.bam
bam
3.68 GB
ENCFF799EIX.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
1.59 GB
ENCFF799EIX.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
1.4 GB
ENCFF116KHO.crop_101-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
1.61 GB
ENCFF116KHO.crop_101-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
1.67 GB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
2.11 GB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
594 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.76 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.93 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
2.02 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
859 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.03 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.67 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
678 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1020 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.07 MB