ENCODE Experiment ENCSR000ETL

Transcription Factor
SMC3
Cell Line
MEL
Description
SMC3 ChIP-seq on mouse MEL produced by the Snyder lab
ENCODE Link
ENCSR000ETL

Files (44)

File Type Size Actions
MEL_SMC3_sequence_rep1_101025_SPADE_00031_FC62P3R_L6_pf.fastq.gz
fastq
953 MB
MEL_SMC3_sequence_rep2_101018_MAGNUM_FC62P53_L2_pf.fastq.gz
fastq
801 MB
ENCFF001NZN.raw.srt.bam
bam
866 MB
ENCFF001NZL.raw.srt.filt.nodup.srt.bam
bam
708 MB
ENCFF001NZL.raw.srt.bam
bam
1.02 GB
ENCFF001NZN.raw.srt.filt.nodup.srt.bam
bam
589 MB
r2.pvalue_signal.bw
bigWig
308 MB
r1.pvalue_signal.bw
bigWig
323 MB
pool.pvalue_signal.bw
bigWig
314 MB
r1.fc_signal.bw
bigWig
320 MB
pool.fc_signal.bw
bigWig
493 MB
ENCFF001NZL.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.5 MB
r2.fc_signal.bw
bigWig
278 MB
ENCFF001NZL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10 MB
ENCFF001NZN.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.74 MB
ENCFF001NZL.raw.srt.filt.nodup.srt.SE-ENCFF001NZN.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.39 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
639 KB
ENCFF001NZL.raw.srt.filt.nodup.srt.SE-ENCFF001NZN.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
661 KB
ENCFF001NZN.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.1 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.08 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.11 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
651 KB
ENCFF001NZN.crop_36-2bp.srt.bam
bam
852 MB
ENCFF001NZL.crop_36-2bp.srt.nodup_x_ENCFF797CGV.fc.signal.bigwig
bigWig
329 MB
rep.pooled_x_ENCFF797CGV.fc.signal.bigwig
bigWig
520 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.48 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.24 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.39 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.11 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
576 KB
ENCFF001NZL.crop_36-2bp.srt.bam
bam
1.01 GB
ENCFF001NZL.crop_36-2bp.srt.nodup.bam
bam
747 MB
ENCFF001NZN.crop_36-2bp.srt.nodup_x_ENCFF797CGV.pval.signal.bigwig
bigWig
392 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.09 MB
ENCFF001NZN.crop_36-2bp.srt.nodup_x_ENCFF797CGV.fc.signal.bigwig
bigWig
287 MB
ENCFF001NZN.crop_36-2bp.srt.nodup.bam
bam
622 MB
ENCFF001NZL.crop_36-2bp.srt.nodup_x_ENCFF797CGV.pval.signal.bigwig
bigWig
335 MB
rep.pooled_x_ENCFF797CGV.pval.signal.bigwig
bigWig
413 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
529 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
681 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
917 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1010 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.13 MB