ENCODE Experiment ENCSR000ERX

Transcription Factor
HCFC1
Cell Line
ES-E14
Description
HCFC1 ChIP-seq mouse ES-E14 produced by the Snyder lab
ENCODE Link
ENCSR000ERX

Files (44)

File Type Size Actions
ES-E14_HCFC1_NB100-68209_sequence_rep1_120224_COLUMBO_00151_FC63B9U_L1_pf.fastq.gz
fastq
452 MB
ES-E14_HCFC1_NB100-68209_sequence_rep2_120313_MAGNUM_00137_FC64KNU_L3_pf.fastq.gz
fastq
1.38 GB
ENCFF001NNG.raw.srt.bam
bam
514 MB
ENCFF001NNI.raw.srt.bam
bam
1.48 GB
ENCFF001NNG.raw.srt.filt.nodup.srt.bam
bam
315 MB
ENCFF001NNI.raw.srt.filt.nodup.srt.bam
bam
910 MB
r1.pvalue_signal.bw
bigWig
352 MB
r2.pvalue_signal.bw
bigWig
487 MB
pool.pvalue_signal.bw
bigWig
475 MB
r1.fc_signal.bw
bigWig
188 MB
r2.fc_signal.bw
bigWig
446 MB
pool.fc_signal.bw
bigWig
567 MB
ENCFF001NNG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.23 MB
ENCFF001NNI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
5.54 MB
ENCFF001NNG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.37 MB
ENCFF001NNG.raw.srt.filt.nodup.srt.SE-ENCFF001NNI.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.72 MB
ENCFF001NNI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
12.6 MB
ENCFF001NNG.raw.srt.filt.nodup.srt.SE-ENCFF001NNI.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
12.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
155 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
202 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
338 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
403 KB
ENCFF001NNI.crop_36-2bp.srt.nodup.bam
bam
965 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
501 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
168 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
395 KB
ENCFF001NNG.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
323 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
543 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
198 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.94 MB
ENCFF001NNG.crop_36-2bp.srt.nodup.bam
bam
334 MB
ENCFF001NNG.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
193 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
350 KB
ENCFF001NNG.crop_36-2bp.srt.bam
bam
509 MB
ENCFF001NNI.crop_36-2bp.srt.bam
bam
1.46 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
729 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
155 KB
ENCFF001NNI.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
412 MB
ENCFF001NNI.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
436 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
58.2 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.58 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.77 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
152 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
336 KB