Transcription Factor
RFX5
Cell Line
SK-N-SH
Description
RFX5 ChIP-seq on human SK-N-SH produced by the Snyder lab
ENCODE Link
ENCSR000EHY

Files (64)

File Type Size Actions
SK-N-SH_RFX5_200-401-194_sequence_rep1_120417_SPADE_00153_FC63BU5_L2_pf.fastq.gz
fastq
1.01 GB
SK-N-SH_RFX5_200-401-194_sequence_rep2_120502_MAGNUM_00150_FC64VKR_L4_pf.fastq.gz
fastq
1.01 GB
ENCFF000ZSL.raw.srt.bam
bam
1.14 GB
ENCFF000ZSL.raw.srt.filt.nodup.srt.bam
bam
755 MB
ENCFF000ZSN.raw.srt.bam
bam
1.28 GB
ENCFF000ZSN.raw.srt.filt.nodup.srt.bam
bam
903 MB
ENCFF000ZSL.raw.srt.bam
bam
1.13 GB
ENCFF000ZSN.raw.srt.bam
bam
1.28 GB
ENCFF000ZSL.raw.srt.filt.nodup.srt.bam
bam
755 MB
ENCFF000ZSN.raw.srt.filt.nodup.srt.bam
bam
903 MB
pool.pvalue_signal.bw
bigWig
599 MB
ENCFF000ZSN.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
5.08 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
319 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
348 KB
ENCFF000ZSL.raw.srt.filt.nodup.srt.SE-ENCFF000ZSN.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
13 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
137 KB
r2.pvalue_signal.bw
bigWig
485 MB
r1.fc_signal.bw
bigWig
412 MB
r2.fc_signal.bw
bigWig
484 MB
pool.fc_signal.bw
bigWig
745 MB
ENCFF000ZSL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
r1.pvalue_signal.bw
bigWig
467 MB
ENCFF000ZSL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.63 MB
ENCFF000ZSL.raw.srt.filt.nodup.srt.SE-ENCFF000ZSN.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.7 MB
ENCFF000ZSN.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
156 KB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
137 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
318 KB
r2.pvalue_signal.bw
bigWig
449 MB
PL.regionPeak.gz
bed narrowPeak
5.71 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
346 KB
r1.pvalue_signal.bw
bigWig
463 MB
r1.fc_signal.bw
bigWig
413 MB
pool.pvalue_signal.bw
bigWig
599 MB
r2.fc_signal.bw
bigWig
483 MB
pool.fc_signal.bw
bigWig
743 MB
R1.regionPeak.gz
bed narrowPeak
4.59 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
5.08 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
13 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
154 KB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
794 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.38 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
137 KB
ENCFF000ZSL.crop_36-2bp.srt.bam
bam
1.11 GB
ENCFF000ZSL.crop_36-2bp.srt.nodup.bam
bam
822 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
179 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
350 KB
ENCFF000ZSN.crop_36-2bp.srt.bam
bam
1.25 GB
ENCFF000ZSN.crop_36-2bp.srt.nodup.bam
bam
975 MB
ENCFF000ZSL.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
496 MB
ENCFF000ZSL.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
457 MB
ENCFF000ZSN.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
559 MB
ENCFF000ZSN.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
511 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
794 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.99 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
75.2 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.92 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
113 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
229 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.14 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
157 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
319 KB