Transcription Factor
SMC3
Cell Line
SK-N-SH
Description
SMC3 ChIP-seq on human SK-N-SH produced by the Snyder lab
ENCODE Link
ENCSR000EHW

Files (64)

File Type Size Actions
SK-N-SH_SMC3_ab9263_sequence_rep1_120330_COLUMBO_00160_FC64KM9_L3_pf.fastq.gz
fastq
899 MB
SK-N-SH_SMC3_ab9263_sequence_rep2_120413_SPADE_00152_FC64KR9_L7_pf.fastq.gz
fastq
835 MB
R2.regionPeak.gz
bed narrowPeak
4.38 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
549 KB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
551 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.12 MB
r1.pvalue_signal.bw
bigWig
456 MB
r1.fc_signal.bw
bigWig
381 MB
r2.fc_signal.bw
bigWig
367 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.03 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
618 KB
r1.fc_signal.bw
bigWig
380 MB
pool.pvalue_signal.bw
bigWig
587 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
r1.pvalue_signal.bw
bigWig
516 MB
r2.pvalue_signal.bw
bigWig
445 MB
r2.fc_signal.bw
bigWig
370 MB
pool.fc_signal.bw
bigWig
631 MB
pool.fc_signal.bw
bigWig
630 MB
r2.pvalue_signal.bw
bigWig
461 MB
pool.pvalue_signal.bw
bigWig
587 MB
R2.regionPeak.gz
bed narrowPeak
4.37 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.19 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
4.84 MB
R1.regionPeak.gz
bed narrowPeak
4.84 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.19 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
618 KB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.03 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.12 MB
ENCFF000ZSU.raw.srt.bam
bam
953 MB
ENCFF000ZSU.raw.srt.filt.nodup.srt.bam
bam
644 MB
ENCFF000ZSS.raw.srt.bam
bam
1000 MB
ENCFF000ZSS.raw.srt.filt.nodup.srt.bam
bam
707 MB
ENCFF000ZSU.raw.srt.bam
bam
949 MB
ENCFF000ZSU.raw.srt.filt.nodup.srt.bam
bam
645 MB
ENCFF000ZSS.raw.srt.bam
bam
997 MB
ENCFF000ZSS.raw.srt.filt.nodup.srt.bam
bam
707 MB
ENCFF000ZSS.crop_36-2bp.srt.bam
bam
980 MB
ENCFF000ZSU.crop_36-2bp.srt.bam
bam
931 MB
ENCFF000ZSU.crop_36-2bp.srt.nodup.bam
bam
704 MB
ENCFF000ZSU.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
395 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
681 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.04 MB
ENCFF000ZSS.crop_36-2bp.srt.nodup.bam
bam
766 MB
ENCFF000ZSS.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
569 MB
ENCFF000ZSS.crop_36-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
405 MB
ENCFF000ZSU.crop_36-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
569 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
632 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.22 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
573 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.64 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.99 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
412 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.19 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
780 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
615 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.06 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
555 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.12 MB