Transcription Factor
CUX1
Cell Line
K562
Description
CUX1 ChIP-seq on human K562 produced by the Snyder lab
ENCODE Link
ENCSR000EFO

Files (64)

File Type Size Actions
K562_CDP_sequence_rep1_101115_KOJAK_00021_FC62V4F_L3_pf.fastq.gz
fastq
1.42 GB
K562_CDP_sequence_rep2_101217_MAGNUM_00045_FC70FPR_L1_pf.fastq.gz
fastq
1.21 GB
ENCFF000YHM.raw.srt.bam
bam
1.62 GB
ENCFF000YHM.raw.srt.filt.nodup.srt.bam
bam
1.13 GB
ENCFF000YHO.raw.srt.bam
bam
1.41 GB
ENCFF000YHO.raw.srt.filt.nodup.srt.bam
bam
979 MB
ENCFF000YHM.raw.srt.bam
bam
1.61 GB
ENCFF000YHO.raw.srt.bam
bam
1.4 GB
ENCFF000YHO.raw.srt.filt.nodup.srt.bam
bam
979 MB
ENCFF000YHM.raw.srt.filt.nodup.srt.bam
bam
1.13 GB
r2.fc_signal.bw
bigWig
461 MB
ENCFF000YHM.raw.srt.filt.nodup.srt.SE-ENCFF000YHO.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
5.69 MB
ENCFF000YHM.raw.srt.filt.nodup.srt.SE-ENCFF000YHO.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
12.6 MB
ENCFF000YHM.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
ENCFF000YHO.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
254 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
120 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
270 KB
r1.fc_signal.bw
bigWig
496 MB
r1.pvalue_signal.bw
bigWig
525 MB
pool.fc_signal.bw
bigWig
797 MB
r2.pvalue_signal.bw
bigWig
487 MB
pool.pvalue_signal.bw
bigWig
508 MB
ENCFF000YHM.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.68 MB
ENCFF000YHO.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
5.04 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
110 KB
r2.fc_signal.bw
bigWig
484 MB
pool.pvalue_signal.bw
bigWig
537 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.67 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
12.6 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
117 KB
r1.pvalue_signal.bw
bigWig
508 MB
r2.pvalue_signal.bw
bigWig
504 MB
pool.fc_signal.bw
bigWig
800 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
249 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
264 KB
r1.fc_signal.bw
bigWig
490 MB
R1.regionPeak.gz
bed narrowPeak
4.75 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
107 KB
R2.fixcoord.regionPeak.gz
bed narrowPeak
5.05 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
ENCFF000YHM.crop_36-2bp.srt.bam
bam
1.59 GB
ENCFF000YHO.crop_36-2bp.srt.bam
bam
1.37 GB
ENCFF000YHO.crop_36-2bp.srt.nodup.bam
bam
1.04 GB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
247 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
223 KB
ENCFF000YHM.crop_36-2bp.srt.nodup.bam
bam
1.23 GB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
128 KB
ENCFF000YHO.crop_36-2bp.srt.nodup_x_ENCFF396DTD.pval.signal.bigwig
bigWig
511 MB
ENCFF000YHO.crop_36-2bp.srt.nodup_x_ENCFF396DTD.fc.signal.bigwig
bigWig
492 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.88 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.7 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.44 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
89 KB
ENCFF000YHM.crop_36-2bp.srt.nodup_x_ENCFF396DTD.pval.signal.bigwig
bigWig
513 MB
ENCFF000YHM.crop_36-2bp.srt.nodup_x_ENCFF396DTD.fc.signal.bigwig
bigWig
513 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
47.8 KB
rep.pooled_x_ENCFF396DTD.pval.signal.bigwig
bigWig
899 MB
rep.pooled_x_ENCFF396DTD.fc.signal.bigwig
bigWig
830 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
270 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.97 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
121 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
106 KB