Transcription Factor
BRCA1
Cell Line
H1
Description
BRCA1 ChIP-seq on human H1-hESC produced by the Snyder lab
ENCODE Link
ENCSR000EBX

Files (64)

File Type Size Actions
hES_BRCA1_sequence_rep1_110427_COLUMBO_00077_FC70KA7_L2_pf.fastq.gz
fastq
1.24 GB
hES_BRCA1_sequence_rep2_110714_MAGNUM_00085_FC64P4N_L2_pf.fastq.gz
fastq
902 MB
ENCFF000WQV.raw.srt.bam
bam
1.01 GB
ENCFF000WQV.raw.srt.filt.nodup.srt.bam
bam
700 MB
ENCFF000WQT.raw.srt.filt.nodup.srt.bam
bam
1010 MB
ENCFF000WQT.raw.srt.bam
bam
1.4 GB
ENCFF000WQV.raw.srt.bam
bam
1.01 GB
ENCFF000WQV.raw.srt.filt.nodup.srt.bam
bam
701 MB
ENCFF000WQT.raw.srt.bam
bam
1.39 GB
ENCFF000WQT.raw.srt.filt.nodup.srt.bam
bam
1010 MB
r2.fc_signal.bw
bigWig
411 MB
r1.pvalue_signal.bw
bigWig
556 MB
pool.pvalue_signal.bw
bigWig
733 MB
pool.fc_signal.bw
bigWig
763 MB
r2.pvalue_signal.bw
bigWig
608 MB
r1.fc_signal.bw
bigWig
504 MB
ENCFF000WQT.raw.srt.filt.nodup.srt.SE-ENCFF000WQV.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
3.04 MB
ENCFF000WQV.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.11 MB
ENCFF000WQV.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.3 MB
ENCFF000WQT.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.09 MB
ENCFF000WQT.raw.srt.filt.nodup.srt.SE-ENCFF000WQV.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
1.39 MB
ENCFF000WQT.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
35 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
98.1 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
89.7 KB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
28.9 KB
r1.pvalue_signal.bw
bigWig
571 MB
pool.pvalue_signal.bw
bigWig
738 MB
r1.fc_signal.bw
bigWig
497 MB
r2.fc_signal.bw
bigWig
401 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
1.35 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
88.4 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
98.7 KB
r2.pvalue_signal.bw
bigWig
578 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
4.11 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
27.9 KB
pool.fc_signal.bw
bigWig
770 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
4.09 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
2.94 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.3 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
35.7 KB
ENCFF000WQV.crop_36-2bp.srt.nodup_x_ENCFF972YCC.pval.signal.bigwig
bigWig
550 MB
rep.pooled_x_ENCFF972YCC.fc.signal.bigwig
bigWig
825 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
98.5 KB
ENCFF000WQT.crop_36-2bp.srt.bam
bam
1.37 GB
ENCFF000WQV.crop_36-2bp.srt.nodup.bam
bam
768 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.4 MB
ENCFF000WQV.crop_36-2bp.srt.bam
bam
1010 MB
ENCFF000WQT.crop_36-2bp.srt.nodup.bam
bam
1.07 GB
ENCFF000WQT.crop_36-2bp.srt.nodup_x_ENCFF972YCC.pval.signal.bigwig
bigWig
591 MB
ENCFF000WQV.crop_36-2bp.srt.nodup_x_ENCFF972YCC.fc.signal.bigwig
bigWig
454 MB
rep.pooled_x_ENCFF972YCC.pval.signal.bigwig
bigWig
741 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
21.6 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
35.6 KB
ENCFF000WQT.crop_36-2bp.srt.nodup_x_ENCFF972YCC.fc.signal.bigwig
bigWig
533 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
79.8 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
89.2 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.56 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
36.6 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.27 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
28.4 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.41 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
99.8 KB