Transcription Factor
BRCA1
Cell Line
GM12878
Description
BRCA1 ChIP-seq on human GM12878 produced by the Snyder lab
ENCODE Link
ENCSR000DZS

Files (64)

File Type Size Actions
wgEncodeSydhTfbsGm12878Brca1a300IggmusRawDataRep1.fastq.gz
fastq
660 MB
wgEncodeSydhTfbsGm12878Brca1a300IggmusRawDataRep2.fastq.gz
fastq
908 MB
ENCFF000VSY-crop.raw.srt.filt.nodup.srt.bam
bam
463 MB
ENCFF000VSY-crop.raw.srt.bam
bam
751 MB
ENCFF000VTI-crop.raw.srt.bam
bam
1010 MB
ENCFF000VTI-crop.raw.srt.filt.nodup.srt.bam
bam
614 MB
ENCFF000VSY-crop.raw.srt.bam
bam
747 MB
ENCFF000VSY-crop.raw.srt.filt.nodup.srt.bam
bam
463 MB
ENCFF000VTI-crop.raw.srt.bam
bam
1010 MB
ENCFF000VTI-crop.raw.srt.filt.nodup.srt.bam
bam
613 MB
pool.pvalue_signal.bw
bigWig
155 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
127 KB
r2.fc_signal.bw
bigWig
234 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
9.19 MB
pool.fc_signal.bw
bigWig
432 MB
R1.regionPeak.gz
bed narrowPeak
34.8 KB
PL.regionPeak.gz
bed narrowPeak
3.97 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
9.59 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
50.3 KB
r2.pvalue_signal.bw
bigWig
69.2 MB
R2.regionPeak.gz
bed narrowPeak
3.42 MB
r1.pvalue_signal.bw
bigWig
187 MB
r1.fc_signal.bw
bigWig
209 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.3 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
31 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
108 KB
PL.fixcoord.regionPeak.gz
bed narrowPeak
3.97 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
10.6 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
62.1 KB
r2.pvalue_signal.bw
bigWig
69.2 MB
pool.pvalue_signal.bw
bigWig
155 MB
pool.fc_signal.bw
bigWig
437 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
3.39 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
176 KB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
9.09 MB
r1.pvalue_signal.bw
bigWig
184 MB
r2.fc_signal.bw
bigWig
235 MB
r1.fc_signal.bw
bigWig
202 MB
R1.regionPeak.gz
bed narrowPeak
42.3 KB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.3 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
35.5 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
114 KB
ENCFF000VTI.crop_28-2bp.srt.bam
bam
959 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
703 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
29.5 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
74.5 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
77.8 KB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
654 MB
ENCFF000VSY.crop_28-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
328 MB
ENCFF000VTI.crop_28-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
492 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.69 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
86.9 KB
ENCFF000VSY.crop_28-2bp.srt.nodup.bam
bam
498 MB
ENCFF000VSY.crop_28-2bp.srt.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
449 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.68 MB
ENCFF000VSY.crop_28-2bp.srt.bam
bam
714 MB
ENCFF000VTI.crop_28-2bp.srt.nodup.bam
bam
669 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
631 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
27.1 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
90.2 KB
ENCFF000VTI.crop_28-2bp.srt.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
445 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
18.3 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.27 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
20.6 KB