Transcription Factor
CTCF
Cell Line
GM12878
Description
CTCF ChIP-seq on human GM12878
ENCODE Link
ENCSR000DZN

Files (60)

File Type Size Actions
wgEncodeSydhTfbsGm12878Ctcfsc15914c20StdRawDataRep2.fastq.gz
fastq
476 MB
wgEncodeSydhTfbsGm12878Ctcfsc15914c20StdRawDataRep1.fastq.gz
fastq
930 MB
ENCFF000VUW.crop_28-2bp.bam
bam
871 MB
ENCFF000VUU-crop.raw.srt.bam
bam
494 MB
ENCFF000VUW-crop.raw.srt.bam
bam
900 MB
ENCFF000VUU-crop.raw.srt.filt.nodup.srt.bam
bam
291 MB
ENCFF000VUW-crop.raw.srt.filt.nodup.srt.bam
bam
514 MB
ENCFF000VUW-crop.raw.srt.bam
bam
898 MB
ENCFF000VUU-crop.raw.srt.bam
bam
492 MB
ENCFF000VUU-crop.raw.srt.filt.nodup.srt.bam
bam
290 MB
ENCFF000VUW-crop.raw.srt.filt.nodup.srt.bam
bam
514 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.26 MB
pool.fc_signal.bw
bigWig
316 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
5.37 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
689 KB
r1.fc_signal.bw
bigWig
214 MB
r2.pvalue_signal.bw
bigWig
195 MB
r2.fc_signal.bw
bigWig
144 MB
R2.regionPeak.gz
bed narrowPeak
2.68 MB
r1.pvalue_signal.bw
bigWig
212 MB
pool.pvalue_signal.bw
bigWig
185 MB
pool.fc_signal.bw
bigWig
316 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
3.8 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
2.58 MB
PL.regionPeak.gz
bed narrowPeak
1.89 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
7.4 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
5.16 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
4.28 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
686 KB
r1.pvalue_signal.bw
bigWig
212 MB
R1.regionPeak.gz
bed narrowPeak
3.82 MB
pool.pvalue_signal.bw
bigWig
202 MB
PL.regionPeak.gz
bed narrowPeak
1.92 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
7.46 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
4.35 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.27 MB
r1.fc_signal.bw
bigWig
214 MB
r2.pvalue_signal.bw
bigWig
195 MB
r2.fc_signal.bw
bigWig
148 MB
ENCFF000VUU.crop_28-2bp.nodup.bam
bam
303 MB
rep.pooled_x_ENCFF000VWV.crop_28-2bp.nodup.fc.signal.bigwig
bigWig
327 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.9 MB
ENCFF000VUU.crop_28-2bp.bam
bam
472 MB
ENCFF000VUW.crop_28-2bp.nodup.bam
bam
535 MB
ENCFF000VUW.crop_28-2bp.nodup_x_ENCFF000VWV.crop_28-2bp.nodup.pval.signal.bigwig
bigWig
271 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
637 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.26 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
695 KB
ENCFF000VUW.crop_28-2bp.nodup_x_ENCFF000VWV.crop_28-2bp.nodup.fc.signal.bigwig
bigWig
219 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.11 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.2 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.28 MB
ENCFF000VUU.crop_28-2bp.nodup_x_ENCFF000VWV.crop_28-2bp.nodup.pval.signal.bigwig
bigWig
195 MB
ENCFF000VUU.crop_28-2bp.nodup_x_ENCFF000VWV.crop_28-2bp.nodup.fc.signal.bigwig
bigWig
149 MB
rep.pooled_x_ENCFF000VWV.crop_28-2bp.nodup.pval.signal.bigwig
bigWig
313 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.15 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
682 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
492 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.5 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
940 KB