ENCODE Experiment ENCSR000DXQ

Transcription Factor: CTCF
Cell Line: SK-N-SH
Description: CTCF ChIP-seq on human SK-N-SH treated with 6uM retinoic acid for 48 hours
ENCODE Link: ENCSR000DXQ

Files (48)

File	Type	Size
wgEncodeUwTfbsSknshraCtcfStdRawDataRep1.fastq.gz	fastq	627 MB
wgEncodeUwTfbsSknshraCtcfStdRawDataRep2.fastq.gz	fastq	656 MB
ENCFF001HXT.crop_36-2bp.bam	bam	667 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz	bed narrowPeak	630 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz	bed narrowPeak	597 KB
ENCFF001HXU.raw.srt.bam	bam	692 MB
ENCFF001HXT.raw.srt.filt.nodup.srt.bam	bam	348 MB
ENCFF001HXU.raw.srt.filt.nodup.srt.bam	bam	326 MB
ENCFF001HXT.raw.srt.bam	bam	673 MB
ENCFF001HXT.raw.srt.filt.nodup.srt.bam	bam	349 MB
ENCFF001HXT.raw.srt.bam	bam	672 MB
ENCFF001HXU.raw.srt.filt.nodup.srt.bam	bam	326 MB
ENCFF001HXU.raw.srt.bam	bam	690 MB
r1.fc_signal.bw	bigWig	118 MB
r2.fc_signal.bw	bigWig	113 MB
r1.pvalue_signal.bw	bigWig	294 MB
R1.regionPeak.gz	bed narrowPeak	2.54 MB
IDR_final_conservative.narrowPeak.gz	bed narrowPeak	764 KB
r2.pvalue_signal.bw	bigWig	251 MB
R1.fixcoord.regionPeak.bb	bigBed narrowPeak	5.21 MB
R2.fixcoord.regionPeak.bb	bigBed narrowPeak	5.33 MB
pool.pvalue_signal.bw	bigWig	301 MB
IDR_final_optimal.narrowPeak.gz	bed narrowPeak	797 KB
IDR_final_optimal.narrowPeak.bb	bigBed narrowPeak	1.42 MB
pool.fc_signal.bw	bigWig	203 MB
R2.regionPeak.gz	bed narrowPeak	2.6 MB
PL.fixcoord.regionPeak.bb	bigBed narrowPeak	9.93 MB
PL.regionPeak.gz	bed narrowPeak	4.19 MB
IDR_final_conservative.narrowPeak.bb	bigBed narrowPeak	1.37 MB
ENCFF001HXT.crop_36-2bp.nodup.bam	bam	373 MB
ENCFF001HXU.crop_36-2bp.nodup_x_ENCFF001HYC.crop_36-2bp.nodup.pval.signal.bigwig	bigWig	271 MB
ENCFF001HXU.crop_36-2bp.nodup_x_ENCFF001HYC.crop_36-2bp.nodup.fc.signal.bigwig	bigWig	121 MB
rep.pooled_x_ENCFF001HYC.crop_36-2bp.nodup.fc.signal.bigwig	bigWig	219 MB
ENCFF001HXT.crop_36-2bp.nodup_x_ENCFF001HYC.crop_36-2bp.nodup.fc.signal.bigwig	bigWig	125 MB
ENCFF001HXU.crop_36-2bp.bam	bam	685 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz	bed idr_ranked_peak	2.31 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb	bigBed narrowPeak	1.14 MB
ENCFF001HXU.crop_36-2bp.nodup.bam	bam	349 MB
ENCFF001HXT.crop_36-2bp.nodup_x_ENCFF001HYC.crop_36-2bp.nodup.pval.signal.bigwig	bigWig	291 MB
rep.pooled_x_ENCFF001HYC.crop_36-2bp.nodup.pval.signal.bigwig	bigWig	370 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz	bed narrowPeak	788 KB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz	bed idr_ranked_peak	2.38 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb	bigBed narrowPeak	1.19 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb	bigBed narrowPeak	1.45 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb	bigBed narrowPeak	1.41 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz	bed narrowPeak	819 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz	bed idr_ranked_peak	3.42 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz	bed idr_ranked_peak	3.43 MB

ENCODE Experiment ENCSR000DXQ

Files (48)

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