Transcription Factor
CTCF
Cell Line
foreskin fibroblast
Description
CTCF ChIP-seq on human NHDF-neo
ENCODE Link
ENCSR000DWQ

Files (64)

File Type Size Actions
wgEncodeUwTfbsNhdfneoCtcfStdRawDataRep1.fastq.gz
fastq
918 MB
wgEncodeUwTfbsNhdfneoCtcfStdRawDataRep2.fastq.gz
fastq
986 MB
ENCFF001HVJ.raw.srt.bam
bam
1.1 GB
ENCFF001HVA.raw.srt.filt.nodup.srt.bam
bam
609 MB
ENCFF001HVA.raw.srt.bam
bam
1000 MB
ENCFF001HVJ.raw.srt.filt.nodup.srt.bam
bam
776 MB
ENCFF001HVA.raw.srt.bam
bam
1000 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.bam
bam
609 MB
ENCFF001HVJ.raw.srt.bam
bam
1.09 GB
ENCFF001HVJ.raw.srt.filt.nodup.srt.bam
bam
777 MB
r2.pvalue_signal.bw
bigWig
418 MB
pool.pvalue_signal.bw
bigWig
587 MB
r1.pvalue_signal.bw
bigWig
414 MB
r2.pvalue_signal.bw
bigWig
538 MB
r2.fc_signal.bw
bigWig
403 MB
r1.pvalue_signal.bw
bigWig
391 MB
r1.fc_signal.bw
bigWig
306 MB
pool.fc_signal.bw
bigWig
597 MB
ENCFF001HVJ.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.5 MB
pool.pvalue_signal.bw
bigWig
579 MB
r1.fc_signal.bw
bigWig
305 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.98 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE-ENCFF001HVJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.97 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
742 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.26 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE-ENCFF001HVJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
ENCFF001HVJ.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
765 KB
r2.fc_signal.bw
bigWig
400 MB
pool.fc_signal.bw
bigWig
592 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.29 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.98 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE-ENCFF001HVJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.99 MB
ENCFF001HVJ.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
ENCFF001HVJ.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.49 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10 MB
ENCFF001HVA.raw.srt.filt.nodup.srt.SE-ENCFF001HVJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
750 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.28 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
771 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.31 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.33 MB
ENCFF001HVJ.crop_36-2bp.nodup_x_ENCFF001HVP.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
457 MB
ENCFF001HVJ.crop_36-2bp.nodup_x_ENCFF001HVP.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
415 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.98 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
787 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.74 MB
ENCFF001HVA.crop_36-2bp.bam
bam
987 MB
ENCFF001HVJ.crop_36-2bp.bam
bam
1.08 GB
ENCFF001HVA.crop_36-2bp.nodup.bam
bam
656 MB
ENCFF001HVJ.crop_36-2bp.nodup.bam
bam
835 MB
ENCFF001HVA.crop_36-2bp.nodup_x_ENCFF001HVP.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
430 MB
ENCFF001HVA.crop_36-2bp.nodup_x_ENCFF001HVP.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
315 MB
rep.pooled_x_ENCFF001HVP.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
529 MB
rep.pooled_x_ENCFF001HVP.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
616 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.57 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
646 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
579 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.77 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.03 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.31 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
770 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.16 MB