Transcription Factor
CTCF
Cell Line
MCF-7
Description
CTCF ChIP-seq on human MCF-7
ENCODE Link
ENCSR000DWH

Files (64)

File Type Size Actions
wgEncodeUwTfbsMcf7CtcfStdRawDataRep2.fastq.gz
fastq
1.07 GB
wgEncodeUwTfbsMcf7CtcfStdRawDataRep1.fastq.gz
fastq
1020 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.48 MB
ENCFF001HUF.raw.srt.filt.nodup.srt.bam
bam
737 MB
ENCFF001HUF.raw.srt.bam
bam
1.18 GB
ENCFF001HUG.raw.srt.filt.nodup.srt.bam
bam
758 MB
ENCFF001HUG.raw.srt.bam
bam
1.12 GB
ENCFF001HUF.raw.srt.bam
bam
1.19 GB
ENCFF001HUF.raw.srt.filt.nodup.srt.bam
bam
736 MB
ENCFF001HUG.raw.srt.bam
bam
1.12 GB
ENCFF001HUG.raw.srt.filt.nodup.srt.bam
bam
758 MB
pool.pvalue_signal.bw
bigWig
520 MB
pool.pvalue_signal.bw
bigWig
519 MB
ENCFF001HUF.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
974 KB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.62 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE-ENCFF001HUF.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.01 MB
r2.pvalue_signal.bw
bigWig
393 MB
r2.pvalue_signal.bw
bigWig
366 MB
r1.fc_signal.bw
bigWig
342 MB
r1.pvalue_signal.bw
bigWig
420 MB
r1.fc_signal.bw
bigWig
342 MB
r2.fc_signal.bw
bigWig
352 MB
pool.fc_signal.bw
bigWig
581 MB
ENCFF001HUF.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.36 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
ENCFF001HUF.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE-ENCFF001HUF.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
933 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.57 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.63 MB
pool.fc_signal.bw
bigWig
576 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.63 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
975 KB
r1.pvalue_signal.bw
bigWig
421 MB
r2.fc_signal.bw
bigWig
349 MB
ENCFF001HUF.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.35 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE-ENCFF001HUF.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.01 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.6 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE-ENCFF001HUF.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11 MB
ENCFF001HUG.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.62 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
933 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.57 MB
ENCFF001HUF.crop_36-2bp.bam
bam
1.17 GB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.6 MB
ENCFF001HUF.crop_36-2bp.nodup_x_ENCFF001HUM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
429 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.53 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
951 KB
rep.pooled_x_ENCFF001HUM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
704 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
891 KB
ENCFF001HUG.crop_36-2bp.nodup_x_ENCFF001HUM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
438 MB
ENCFF001HUG.crop_36-2bp.bam
bam
1.1 GB
ENCFF001HUF.crop_36-2bp.nodup.bam
bam
800 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.01 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
993 KB
ENCFF001HUG.crop_36-2bp.nodup.bam
bam
825 MB
ENCFF001HUG.crop_36-2bp.nodup_x_ENCFF001HUM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
366 MB
ENCFF001HUF.crop_36-2bp.nodup_x_ENCFF001HUM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
373 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.85 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
737 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.51 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.65 MB
rep.pooled_x_ENCFF001HUM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
621 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.25 MB