Transcription Factor
CTCF
Cell Line
fibroblast of villous mesenchyme
Description
CTCF ChIP-seq on human HVMF
ENCODE Link
ENCSR000DVQ

Files (64)

File Type Size Actions
wgEncodeUwTfbsHvmfCtcfStdRawDataRep1.fastq.gz
fastq
623 MB
wgEncodeUwTfbsHvmfCtcfStdRawDataRep2.fastq.gz
fastq
494 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.35 MB
ENCFF001HSX.raw.srt.filt.nodup.srt.bam
bam
356 MB
ENCFF001HSX.raw.srt.bam
bam
551 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.bam
bam
481 MB
ENCFF001HSW.raw.srt.bam
bam
712 MB
ENCFF001HSW.raw.srt.bam
bam
710 MB
ENCFF001HSX.raw.srt.filt.nodup.srt.bam
bam
356 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.bam
bam
482 MB
ENCFF001HSX.raw.srt.bam
bam
549 MB
r1.pvalue_signal.bw
bigWig
421 MB
r2.pvalue_signal.bw
bigWig
349 MB
pool.pvalue_signal.bw
bigWig
528 MB
pool.fc_signal.bw
bigWig
382 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.2 MB
r1.fc_signal.bw
bigWig
249 MB
r2.fc_signal.bw
bigWig
184 MB
ENCFF001HSX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.31 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
729 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.25 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.09 MB
ENCFF001HSX.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
2.93 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.SE-ENCFF001HSX.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.48 MB
ENCFF001HSW.raw.srt.filt.nodup.srt.SE-ENCFF001HSX.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.8 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
754 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.28 MB
pool.pvalue_signal.bw
bigWig
517 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
2.93 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
727 KB
r2.pvalue_signal.bw
bigWig
403 MB
r2.fc_signal.bw
bigWig
184 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
4.08 MB
pool.fc_signal.bw
bigWig
387 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.2 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
7.32 MB
r1.pvalue_signal.bw
bigWig
351 MB
r1.fc_signal.bw
bigWig
250 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.25 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.28 MB
PL.regionPeak.gz
bed narrowPeak
4.48 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
750 KB
ENCFF001HSW.crop_36-2bp.nodup_x_ENCFF001HTK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
385 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
741 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.27 MB
ENCFF001HSW.crop_36-2bp.bam
bam
698 MB
ENCFF001HSX.crop_36-2bp.nodup.bam
bam
383 MB
ENCFF001HSW.crop_36-2bp.nodup_x_ENCFF001HTK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
259 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.43 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
590 KB
ENCFF001HSX.crop_36-2bp.bam
bam
541 MB
ENCFF001HSW.crop_36-2bp.nodup.bam
bam
521 MB
ENCFF001HSX.crop_36-2bp.nodup_x_ENCFF001HTK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
390 MB
ENCFF001HSX.crop_36-2bp.nodup_x_ENCFF001HTK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
194 MB
rep.pooled_x_ENCFF001HTK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
413 MB
rep.pooled_x_ENCFF001HTK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
402 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
549 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.16 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
763 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.37 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.1 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.3 MB