Transcription Factor
CTCF
Cell Line
retinal pigment epithelial cell
Description
CTCF ChIP-seq on human HRPEpiC
ENCODE Link
ENCSR000DVI

Files (60)

File Type Size Actions
wgEncodeUwTfbsHrpeCtcfStdRawDataRep2.fastq.gz
fastq
685 MB
wgEncodeUwTfbsHrpeCtcfStdRawDataRep1.fastq.gz
fastq
1.1 GB
ENCFF001HRY.crop_36-2bp.bam
bam
764 MB
ENCFF001HSF.crop_36-2bp.nodup_x_ENCFF001HSI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
348 MB
ENCFF001HRY.raw.srt.bam
bam
779 MB
ENCFF001HRY.raw.srt.filt.nodup.srt.bam
bam
517 MB
ENCFF001HSF.raw.srt.bam
bam
1.26 GB
ENCFF001HSF.raw.srt.filt.nodup.srt.bam
bam
873 MB
ENCFF001HRY.raw.srt.filt.nodup.srt.bam
bam
517 MB
ENCFF001HRY.raw.srt.bam
bam
777 MB
ENCFF001HSF.raw.srt.filt.nodup.srt.bam
bam
874 MB
ENCFF001HSF.raw.srt.bam
bam
1.25 GB
r2.pvalue_signal.bw
bigWig
309 MB
pool.pvalue_signal.bw
bigWig
356 MB
r1.fc_signal.bw
bigWig
342 MB
ENCFF001HSF.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.18 MB
ENCFF001HSF.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
ENCFF001HRY.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.87 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
893 KB
r1.pvalue_signal.bw
bigWig
379 MB
r2.fc_signal.bw
bigWig
225 MB
pool.fc_signal.bw
bigWig
502 MB
ENCFF001HSF.raw.srt.filt.nodup.srt.SE-ENCFF001HRY.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.46 MB
ENCFF001HRY.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.92 MB
ENCFF001HSF.raw.srt.filt.nodup.srt.SE-ENCFF001HRY.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.8 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.53 MB
r2.pvalue_signal.bw
bigWig
333 MB
pool.pvalue_signal.bw
bigWig
356 MB
pool.fc_signal.bw
bigWig
498 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
4.45 MB
r1.fc_signal.bw
bigWig
343 MB
r2.fc_signal.bw
bigWig
225 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.5 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
7.93 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.8 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
887 KB
r1.pvalue_signal.bw
bigWig
380 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
4.17 MB
R2.regionPeak.gz
bed narrowPeak
3.87 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.52 MB
ENCFF001HRY.crop_36-2bp.nodup_x_ENCFF001HSI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
242 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.29 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
834 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.29 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
634 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
668 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.17 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.24 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.55 MB
ENCFF001HSF.crop_36-2bp.bam
bam
1.23 GB
ENCFF001HRY.crop_36-2bp.nodup.bam
bam
560 MB
ENCFF001HSF.crop_36-2bp.nodup_x_ENCFF001HSI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
416 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.72 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
907 KB
ENCFF001HRY.crop_36-2bp.nodup_x_ENCFF001HSI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
314 MB
rep.pooled_x_ENCFF001HSI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
528 MB
ENCFF001HSF.crop_36-2bp.nodup.bam
bam
946 MB
rep.pooled_x_ENCFF001HSI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
515 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.72 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.46 MB