Transcription Factor
CTCF
Cell Line
mammary epithelial cell
Description
CTCF ChIP-seq on human HMEC
ENCODE Link
ENCSR000DUS

Files (60)

File Type Size Actions
wgEncodeUwTfbsHmecCtcfStdRawDataRep2.fastq.gz
fastq
760 MB
wgEncodeUwTfbsHmecCtcfStdRawDataRep1.fastq.gz
fastq
1.16 GB
ENCFF001HPL.crop_36-2bp.nodup_x_ENCFF001HPU.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
290 MB
ENCFF001HPL.raw.srt.bam
bam
825 MB
ENCFF001HPL.raw.srt.filt.nodup.srt.bam
bam
499 MB
ENCFF001HPM.raw.srt.bam
bam
1.19 GB
ENCFF001HPM.raw.srt.filt.nodup.srt.bam
bam
558 MB
ENCFF001HPL.raw.srt.bam
bam
823 MB
ENCFF001HPL.raw.srt.filt.nodup.srt.bam
bam
499 MB
ENCFF001HPM.raw.srt.bam
bam
1.18 GB
ENCFF001HPM.raw.srt.filt.nodup.srt.bam
bam
558 MB
r1.pvalue_signal.bw
bigWig
283 MB
r1.fc_signal.bw
bigWig
197 MB
r2.fc_signal.bw
bigWig
215 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
858 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.47 MB
r2.pvalue_signal.bw
bigWig
257 MB
pool.pvalue_signal.bw
bigWig
324 MB
pool.fc_signal.bw
bigWig
358 MB
ENCFF001HPL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.1 MB
ENCFF001HPM.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.53 MB
ENCFF001HPM.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.09 MB
ENCFF001HPM.raw.srt.filt.nodup.srt.SE-ENCFF001HPL.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
3.83 MB
ENCFF001HPM.raw.srt.filt.nodup.srt.SE-ENCFF001HPL.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
9.32 MB
ENCFF001HPL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
9.93 MB
r1.pvalue_signal.bw
bigWig
284 MB
r1.fc_signal.bw
bigWig
197 MB
pool.pvalue_signal.bw
bigWig
324 MB
pool.fc_signal.bw
bigWig
357 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.49 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
9.94 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
869 KB
r2.pvalue_signal.bw
bigWig
281 MB
r2.fc_signal.bw
bigWig
216 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
3.56 MB
R2.regionPeak.gz
bed narrowPeak
4.12 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
7.14 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
9.39 MB
PL.regionPeak.gz
bed narrowPeak
3.87 MB
ENCFF001HPM.crop_36-2bp.nodup_x_ENCFF001HPU.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
207 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
723 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.31 MB
ENCFF001HPM.crop_36-2bp.nodup.bam
bam
600 MB
ENCFF001HPL.crop_36-2bp.nodup_x_ENCFF001HPU.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
226 MB
rep.pooled_x_ENCFF001HPU.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
343 MB
rep.pooled_x_ENCFF001HPU.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
385 MB
ENCFF001HPM.crop_36-2bp.nodup_x_ENCFF001HPU.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
277 MB
ENCFF001HPL.crop_36-2bp.bam
bam
813 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
633 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
868 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.23 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.49 MB
ENCFF001HPL.crop_36-2bp.nodup.bam
bam
537 MB
ENCFF001HPM.crop_36-2bp.bam
bam
1.18 GB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
694 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.77 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.18 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.55 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.77 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.82 MB