Transcription Factor
CTCF
Cell Line
HeLa-S3
Description
CTCF ChIP-seq on human HeLa-S3
ENCODE Link
ENCSR000DUB

Files (64)

File Type Size Actions
wgEncodeUwTfbsHelas3CtcfStdRawDataRep1.fastq.gz
fastq
510 MB
wgEncodeUwTfbsHelas3CtcfStdRawDataRep2.fastq.gz
fastq
700 MB
rep.pooled_x_ENCFF001HNS.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
212 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.13 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.47 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.13 MB
ENCFF001HNI.raw.srt.bam
bam
520 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.bam
bam
180 MB
ENCFF001HNP.raw.srt.bam
bam
742 MB
ENCFF001HNP.raw.srt.filt.nodup.srt.bam
bam
350 MB
ENCFF001HNI.raw.srt.bam
bam
518 MB
ENCFF001HNP.raw.srt.filt.nodup.srt.bam
bam
350 MB
ENCFF001HNP.raw.srt.bam
bam
741 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.bam
bam
180 MB
ENCFF001HNP.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
4.81 MB
r1.pvalue_signal.bw
bigWig
223 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
1.69 MB
r1.fc_signal.bw
bigWig
79.7 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
3.65 MB
r2.pvalue_signal.bw
bigWig
276 MB
pool.pvalue_signal.bw
bigWig
278 MB
r2.fc_signal.bw
bigWig
131 MB
pool.fc_signal.bw
bigWig
197 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.SE-ENCFF001HNP.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
3.94 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.02 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
616 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.11 MB
ENCFF001HNP.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
2.31 MB
ENCFF001HNI.raw.srt.filt.nodup.srt.SE-ENCFF001HNP.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
9.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
548 KB
r1.pvalue_signal.bw
bigWig
238 MB
r2.pvalue_signal.bw
bigWig
235 MB
pool.pvalue_signal.bw
bigWig
329 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
4.81 MB
r1.fc_signal.bw
bigWig
79.7 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
615 KB
PL.fixcoord.regionPeak.gz
bed narrowPeak
3.93 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
3.53 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.1 MB
pool.fc_signal.bw
bigWig
195 MB
R2.regionPeak.gz
bed narrowPeak
2.31 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
548 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.02 MB
r2.fc_signal.bw
bigWig
131 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
1.65 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
9.66 MB
ENCFF001HNI.crop_36-2bp.bam
bam
515 MB
ENCFF001HNP.crop_36-2bp.bam
bam
734 MB
ENCFF001HNI.crop_36-2bp.nodup.bam
bam
195 MB
ENCFF001HNP.crop_36-2bp.nodup.bam
bam
379 MB
ENCFF001HNI.crop_36-2bp.nodup_x_ENCFF001HNS.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
261 MB
ENCFF001HNI.crop_36-2bp.nodup_x_ENCFF001HNS.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
85 MB
ENCFF001HNP.crop_36-2bp.nodup_x_ENCFF001HNS.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
287 MB
ENCFF001HNP.crop_36-2bp.nodup_x_ENCFF001HNS.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
139 MB
rep.pooled_x_ENCFF001HNS.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
322 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.41 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
333 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
514 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.67 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
980 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
633 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
561 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
542 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.04 MB