Transcription Factor
CTCF
Cell Line
GM12878
Description
CTCF ChIP-seq on human GM12878
ENCODE Link
ENCSR000DRZ

Files (64)

File Type Size Actions
wgEncodeUwTfbsGm12878CtcfStdRawDataRep1.fastq.gz
fastq
457 MB
wgEncodeUwTfbsGm12878CtcfStdRawDataRep2.fastq.gz
fastq
1.03 GB
ENCFF001HIA.crop_36-2bp.nodup.bam
bam
656 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
565 KB
ENCFF001HHX.raw.srt.filt.nodup.srt.bam
bam
175 MB
ENCFF001HHX.raw.srt.bam
bam
472 MB
ENCFF001HIA.raw.srt.bam
bam
1.12 GB
ENCFF001HIA.raw.srt.filt.nodup.srt.bam
bam
602 MB
ENCFF001HHX.raw.srt.bam
bam
473 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.bam
bam
175 MB
ENCFF001HIA.raw.srt.bam
bam
1.12 GB
ENCFF001HIA.raw.srt.filt.nodup.srt.bam
bam
603 MB
r1.pvalue_signal.bw
bigWig
215 MB
r2.pvalue_signal.bw
bigWig
259 MB
pool.pvalue_signal.bw
bigWig
268 MB
r1.fc_signal.bw
bigWig
74.7 MB
r2.fc_signal.bw
bigWig
209 MB
pool.fc_signal.bw
bigWig
264 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
1.67 MB
ENCFF001HIA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.74 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE-ENCFF001HIA.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
3.97 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
3.57 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.03 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.13 MB
ENCFF001HIA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.49 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE-ENCFF001HIA.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
9.83 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
560 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
630 KB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE-ENCFF001HIA.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
3.97 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
560 KB
r1.pvalue_signal.bw
bigWig
233 MB
r2.pvalue_signal.bw
bigWig
259 MB
pool.pvalue_signal.bw
bigWig
268 MB
r1.fc_signal.bw
bigWig
74 MB
r2.fc_signal.bw
bigWig
208 MB
pool.fc_signal.bw
bigWig
262 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
1.68 MB
ENCFF001HIA.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
3.74 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
3.6 MB
ENCFF001HIA.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.49 MB
ENCFF001HHX.raw.srt.filt.nodup.srt.SE-ENCFF001HIA.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
9.86 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.03 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
632 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.13 MB
ENCFF001HHX.crop_36-2bp.bam
bam
469 MB
ENCFF001HIA.crop_36-2bp.bam
bam
1.11 GB
ENCFF001HHX.crop_36-2bp.nodup.bam
bam
190 MB
ENCFF001HHX.crop_36-2bp.nodup_x_ENCFF001HID.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
215 MB
ENCFF001HHX.crop_36-2bp.nodup_x_ENCFF001HID.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
80.1 MB
ENCFF001HIA.crop_36-2bp.nodup_x_ENCFF001HID.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
312 MB
ENCFF001HIA.crop_36-2bp.nodup_x_ENCFF001HID.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
224 MB
rep.pooled_x_ENCFF001HID.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
280 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.16 MB
rep.pooled_x_ENCFF001HID.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
293 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.31 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
474 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
292 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.75 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
648 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.08 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
539 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.39 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1020 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.04 MB