Transcription Factor
CTCF
Cell Line
GM12874
Description
CTCF ChIP-seq on human GM12874
ENCODE Link
ENCSR000DRR

Files (64)

File Type Size Actions
wgEncodeUwTfbsGm12874CtcfStdRawDataRep1.fastq.gz
fastq
551 MB
wgEncodeUwTfbsGm12874CtcfStdRawDataRep2.fastq.gz
fastq
577 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
615 KB
ENCFF001HHG.crop_36-2bp.bam
bam
651 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
350 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
632 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.11 MB
ENCFF001HGY.raw.srt.bam
bam
590 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.bam
bam
243 MB
ENCFF001HHG.raw.srt.filt.nodup.srt.bam
bam
432 MB
ENCFF001HHG.raw.srt.bam
bam
661 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.bam
bam
243 MB
ENCFF001HGY.raw.srt.bam
bam
588 MB
ENCFF001HHG.raw.srt.filt.nodup.srt.bam
bam
432 MB
ENCFF001HHG.raw.srt.bam
bam
659 MB
r1.pvalue_signal.bw
bigWig
261 MB
pool.pvalue_signal.bw
bigWig
285 MB
r2.pvalue_signal.bw
bigWig
275 MB
r1.fc_signal.bw
bigWig
95 MB
ENCFF001HHG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
2.88 MB
pool.fc_signal.bw
bigWig
232 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
2.12 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.SE-ENCFF001HHG.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.12 MB
r2.fc_signal.bw
bigWig
160 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
4.42 MB
ENCFF001HGY.raw.srt.filt.nodup.srt.SE-ENCFF001HHG.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
9.88 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
632 KB
ENCFF001HHG.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
5.93 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
612 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.14 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.11 MB
r2.fc_signal.bw
bigWig
158 MB
r2.pvalue_signal.bw
bigWig
305 MB
pool.fc_signal.bw
bigWig
232 MB
pool.pvalue_signal.bw
bigWig
285 MB
r1.pvalue_signal.bw
bigWig
218 MB
r1.fc_signal.bw
bigWig
93.5 MB
PL.regionPeak.gz
bed narrowPeak
4.12 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
5.98 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
9.87 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.14 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
2.11 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
2.92 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.11 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
611 KB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
4.4 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
630 KB
ENCFF001HHG.crop_36-2bp.nodup_x_ENCFF001HHJ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
164 MB
rep.pooled_x_ENCFF001HHJ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
354 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.76 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
567 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.14 MB
ENCFF001HHG.crop_36-2bp.nodup.bam
bam
470 MB
ENCFF001HGY.crop_36-2bp.nodup_x_ENCFF001HHJ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
251 MB
ENCFF001HGY.crop_36-2bp.nodup_x_ENCFF001HHJ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
97.6 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.74 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
990 KB
ENCFF001HGY.crop_36-2bp.bam
bam
581 MB
ENCFF001HGY.crop_36-2bp.nodup.bam
bam
264 MB
ENCFF001HHG.crop_36-2bp.nodup_x_ENCFF001HHJ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
254 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.98 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
513 KB
rep.pooled_x_ENCFF001HHJ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
238 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.59 MB