Transcription Factor
CTCF
Cell Line
GM06990
Description
CTCF ChIP-seq on human GM06990
ENCODE Link
ENCSR000DQW

Files (64)

File Type Size Actions
wgEncodeUwTfbsGm06990CtcfStdRawDataRep1.fastq.gz
fastq
1.08 GB
wgEncodeUwTfbsGm06990CtcfStdRawDataRep2.fastq.gz
fastq
1.21 GB
ENCFF001HBD.crop_36-2bp.bam
bam
1.21 GB
ENCFF001HBC.raw.srt.filt.nodup.srt.bam
bam
306 MB
ENCFF001HBC.raw.srt.bam
bam
1.07 GB
ENCFF001HBD.raw.srt.bam
bam
1.23 GB
ENCFF001HBD.raw.srt.filt.nodup.srt.bam
bam
389 MB
ENCFF001HBD.raw.srt.filt.nodup.srt.bam
bam
386 MB
ENCFF001HBC.raw.srt.bam
bam
1.07 GB
ENCFF001HBD.raw.srt.bam
bam
1.22 GB
ENCFF001HBC.raw.srt.filt.nodup.srt.bam
bam
304 MB
r2.pvalue_signal.bw
bigWig
214 MB
pool.pvalue_signal.bw
bigWig
267 MB
r1.pvalue_signal.bw
bigWig
227 MB
r1.fc_signal.bw
bigWig
116 MB
pool.fc_signal.bw
bigWig
240 MB
r2.fc_signal.bw
bigWig
146 MB
ENCFF001HBC.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.06 MB
ENCFF001HBC.raw.srt.filt.nodup.srt.SE-ENCFF001HBD.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.31 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
793 KB
ENCFF001HBD.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
9.46 MB
ENCFF001HBC.raw.srt.filt.nodup.srt.SE-ENCFF001HBD.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.2 MB
ENCFF001HBC.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
6.15 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.31 MB
ENCFF001HBD.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.95 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
765 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.34 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
4.12 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.2 MB
r2.pvalue_signal.bw
bigWig
233 MB
r1.pvalue_signal.bw
bigWig
214 MB
pool.pvalue_signal.bw
bigWig
273 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
3.79 MB
r1.fc_signal.bw
bigWig
115 MB
r2.fc_signal.bw
bigWig
146 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
5.9 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.23 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
2.88 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
9.96 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
697 KB
pool.fc_signal.bw
bigWig
241 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
7.55 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
719 KB
ENCFF001HBC.crop_36-2bp.bam
bam
1.06 GB
ENCFF001HBC.crop_36-2bp.nodup.bam
bam
331 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.34 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.36 MB
rep.pooled_x_ENCFF001HBK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
257 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.14 MB
ENCFF001HBD.crop_36-2bp.nodup.bam
bam
421 MB
ENCFF001HBC.crop_36-2bp.nodup_x_ENCFF001HBK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
261 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.34 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.03 MB
ENCFF001HBC.crop_36-2bp.nodup_x_ENCFF001HBK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
126 MB
rep.pooled_x_ENCFF001HBK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
311 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
775 KB
ENCFF001HBD.crop_36-2bp.nodup_x_ENCFF001HBK.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
295 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.09 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
564 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
650 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
802 KB
ENCFF001HBD.crop_36-2bp.nodup_x_ENCFF001HBK.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
155 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.36 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.32 MB