Transcription Factor
CTCF
Cell Line
Caco-2
Description
CTCF ChIP-seq on human Caco-2
ENCODE Link
ENCSR000DQN

Files (64)

File Type Size Actions
wgEncodeUwTfbsCaco2CtcfStdRawDataRep1.fastq.gz
fastq
1.06 GB
wgEncodeUwTfbsCaco2CtcfStdRawDataRep2.fastq.gz
fastq
1.1 GB
ENCFF001HAI.crop_36-2bp.nodup_x_ENCFF001HAM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
303 MB
ENCFF001HAJ.crop_36-2bp.nodup_x_ENCFF001HAM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
218 MB
ENCFF001HAI.raw.srt.bam
bam
1.08 GB
ENCFF001HAI.raw.srt.filt.nodup.srt.bam
bam
354 MB
ENCFF001HAJ.raw.srt.filt.nodup.srt.bam
bam
547 MB
ENCFF001HAJ.raw.srt.bam
bam
1.19 GB
ENCFF001HAI.raw.srt.bam
bam
1.08 GB
ENCFF001HAJ.raw.srt.bam
bam
1.19 GB
ENCFF001HAJ.raw.srt.filt.nodup.srt.bam
bam
547 MB
ENCFF001HAI.raw.srt.filt.nodup.srt.bam
bam
354 MB
r2.pvalue_signal.bw
bigWig
260 MB
r2.fc_signal.bw
bigWig
202 MB
ENCFF001HAI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
6.75 MB
ENCFF001HAJ.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
7.3 MB
r1.pvalue_signal.bw
bigWig
280 MB
pool.pvalue_signal.bw
bigWig
291 MB
pool.fc_signal.bw
bigWig
315 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
729 KB
r1.fc_signal.bw
bigWig
138 MB
ENCFF001HAI.raw.srt.filt.nodup.srt.SE-ENCFF001HAJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
7.93 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
673 KB
ENCFF001HAI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.37 MB
ENCFF001HAJ.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
3.63 MB
ENCFF001HAI.raw.srt.filt.nodup.srt.SE-ENCFF001HAJ.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
3.97 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.17 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.25 MB
r1.fc_signal.bw
bigWig
138 MB
r2.pvalue_signal.bw
bigWig
260 MB
r2.fc_signal.bw
bigWig
205 MB
r1.pvalue_signal.bw
bigWig
263 MB
pool.pvalue_signal.bw
bigWig
292 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
6.75 MB
pool.fc_signal.bw
bigWig
315 MB
R1.regionPeak.gz
bed narrowPeak
3.38 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
7.32 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
7.95 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
676 KB
R2.regionPeak.gz
bed narrowPeak
3.64 MB
PL.regionPeak.gz
bed narrowPeak
3.98 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.17 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.27 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
741 KB
ENCFF001HAI.crop_36-2bp.bam
bam
1.07 GB
ENCFF001HAJ.crop_36-2bp.bam
bam
1.18 GB
rep.pooled_x_ENCFF001HAM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
337 MB
ENCFF001HAJ.crop_36-2bp.nodup.bam
bam
594 MB
rep.pooled_x_ENCFF001HAM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
355 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
514 KB
ENCFF001HAI.crop_36-2bp.nodup.bam
bam
382 MB
ENCFF001HAJ.crop_36-2bp.nodup_x_ENCFF001HAM.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
278 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.12 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.27 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.2 MB
ENCFF001HAI.crop_36-2bp.nodup_x_ENCFF001HAM.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
147 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.05 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
711 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
481 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
739 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
691 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.19 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.26 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
975 KB