Transcription Factor
CTCF
Cell Line
A549
Description
CTCF ChIP-seq on human A549
ENCODE Link
ENCSR000DNA

Files (64)

File Type Size Actions
wgEncodeOpenChromChipA549CtcfRawDataRep1.fastq.gz
fastq
1.24 GB
wgEncodeOpenChromChipA549CtcfRawDataRep2.fastq.gz
fastq
1.25 GB
ENCFF000RMB.raw.srt.bam
bam
1.65 GB
ENCFF000RMC.raw.srt.bam
bam
1.59 GB
ENCFF000RMC.raw.srt.filt.nodup.srt.bam
bam
893 MB
ENCFF000RMB.raw.srt.filt.nodup.srt.bam
bam
906 MB
ENCFF000RMC.raw.srt.bam
bam
1.59 GB
ENCFF000RMB.raw.srt.bam
bam
1.65 GB
ENCFF000RMB.raw.srt.filt.nodup.srt.bam
bam
906 MB
ENCFF000RMC.raw.srt.filt.nodup.srt.bam
bam
893 MB
r1.pvalue_signal.bw
bigWig
597 MB
r2.pvalue_signal.bw
bigWig
546 MB
pool.pvalue_signal.bw
bigWig
593 MB
r1.fc_signal.bw
bigWig
434 MB
r2.fc_signal.bw
bigWig
436 MB
pool.fc_signal.bw
bigWig
683 MB
ENCFF000RMB.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.05 MB
ENCFF000RMC.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.25 MB
ENCFF000RMB.raw.srt.filt.nodup.srt.SE-ENCFF000RMC.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
5.89 MB
ENCFF000RMB.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
11 MB
ENCFF000RMC.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
ENCFF000RMB.raw.srt.filt.nodup.srt.SE-ENCFF000RMC.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11.3 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
562 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.07 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
678 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.24 MB
r2.pvalue_signal.bw
bigWig
524 MB
pool.pvalue_signal.bw
bigWig
593 MB
pool.fc_signal.bw
bigWig
686 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
561 KB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.05 MB
R2.regionPeak.gz
bed narrowPeak
5.25 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.3 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.07 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
677 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.23 MB
r2.fc_signal.bw
bigWig
438 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.89 MB
r1.pvalue_signal.bw
bigWig
569 MB
r1.fc_signal.bw
bigWig
443 MB
ENCFF000RMC.crop_36-2bp.bam
bam
1.54 GB
ENCFF000RMB.crop_36-2bp.nodup.bam
bam
1.01 GB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.25 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
853 KB
ENCFF000RMB.crop_36-2bp.nodup_x_ENCFF000RMI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
499 MB
ENCFF000RMC.crop_36-2bp.nodup_x_ENCFF000RMI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
657 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.97 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
748 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.32 MB
ENCFF000RMC.crop_36-2bp.nodup_x_ENCFF000RMI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
476 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
575 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.47 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.09 MB
ENCFF000RMB.crop_36-2bp.bam
bam
1.59 GB
ENCFF000RMC.crop_36-2bp.nodup.bam
bam
1000 MB
ENCFF000RMB.crop_36-2bp.nodup_x_ENCFF000RMI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
492 MB
rep.pooled_x_ENCFF000RMI.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
813 MB
rep.pooled_x_ENCFF000RMI.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
763 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.32 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.94 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
685 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.79 MB