Transcription Factor
CTCF
Cell Line
MCF-7
Description
CTCF ChIP-seq on human MCF-7 treated with estrogen
ENCODE Link
ENCSR000DMS

Files (60)

File Type Size Actions
wgEncodeOpenChromChipMcf7CtcfEstroRawDataRep1.fastq.gz
fastq
1.43 GB
wgEncodeOpenChromChipMcf7CtcfEstroRawDataRep2.fastq.gz
fastq
1.43 GB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.45 MB
ENCFF000SAB.raw.srt.bam
bam
2 GB
ENCFF000SAD.raw.srt.bam
bam
2 GB
ENCFF000SAD.raw.srt.bam
bam
2.01 GB
ENCFF000SAB.raw.srt.bam
bam
2 GB
ENCFF000SAD.raw.srt.filt.nodup.srt.bam
bam
1.26 GB
ENCFF000SAD.raw.srt.filt.nodup.srt.bam
bam
1.26 GB
ENCFF000SAB.raw.srt.filt.nodup.srt.bam
bam
1.19 GB
ENCFF000SAB.raw.srt.filt.nodup.srt.bam
bam
1.19 GB
r1.pvalue_signal.bw
bigWig
499 MB
r2.pvalue_signal.bw
bigWig
498 MB
r2.fc_signal.bw
bigWig
615 MB
pool.fc_signal.bw
bigWig
975 MB
r1.fc_signal.bw
bigWig
577 MB
pool.pvalue_signal.bw
bigWig
485 MB
R2.regionPeak.gz
bed narrowPeak
5.01 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.15 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.5 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.02 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.75 MB
PL.regionPeak.gz
bed narrowPeak
6.03 MB
r1.fc_signal.bw
bigWig
574 MB
r1.pvalue_signal.bw
bigWig
499 MB
pool.pvalue_signal.bw
bigWig
485 MB
r2.pvalue_signal.bw
bigWig
498 MB
pool.fc_signal.bw
bigWig
965 MB
r2.fc_signal.bw
bigWig
614 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.4 MB
R2.regionPeak.gz
bed narrowPeak
5.04 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.02 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.75 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.15 MB
PL.regionPeak.gz
bed narrowPeak
6.02 MB
ENCFF000SAD.crop_36-2bp.nodup.bam
bam
1.39 GB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.48 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.04 MB
ENCFF000SAB.crop_36-2bp.bam
bam
1.92 GB
ENCFF000SAD.crop_36-2bp.bam
bam
1.93 GB
ENCFF000SAB.crop_36-2bp.nodup.bam
bam
1.32 GB
ENCFF000SAB.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
563 MB
ENCFF000SAB.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
627 MB
ENCFF000SAD.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
686 MB
ENCFF000SAD.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
661 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
922 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
1.03 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.5 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
935 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1010 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
824 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.5 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.57 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.65 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.77 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.46 MB