Transcription Factor
CTCF
Cell Line
MCF-7
Description
CTCF ChIP-seq on human MCF-7 treated with vehicle
ENCODE Link
ENCSR000DMR

Files (60)

File Type Size Actions
wgEncodeOpenChromChipMcf7CtcfVehRawDataRep2.fastq.gz
fastq
1.13 GB
wgEncodeOpenChromChipMcf7CtcfVehRawDataRep1.fastq.gz
fastq
1.22 GB
ENCFF000SAX.crop_36-2bp.nodup.bam
bam
1010 MB
ENCFF000SAY.raw.srt.bam
bam
1.63 GB
ENCFF000SAX.raw.srt.filt.nodup.srt.bam
bam
918 MB
ENCFF000SAX.raw.srt.bam
bam
1.52 GB
ENCFF000SAY.raw.srt.filt.nodup.srt.bam
bam
981 MB
ENCFF000SAX.raw.srt.bam
bam
1.51 GB
ENCFF000SAY.raw.srt.bam
bam
1.62 GB
ENCFF000SAY.raw.srt.filt.nodup.srt.bam
bam
982 MB
ENCFF000SAX.raw.srt.filt.nodup.srt.bam
bam
918 MB
r1.pvalue_signal.bw
bigWig
489 MB
r2.pvalue_signal.bw
bigWig
482 MB
pool.pvalue_signal.bw
bigWig
482 MB
r1.fc_signal.bw
bigWig
494 MB
r2.fc_signal.bw
bigWig
477 MB
pool.fc_signal.bw
bigWig
782 MB
ENCFF000SAY.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.15 MB
ENCFF000SAX.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.11 MB
ENCFF000SAY.raw.srt.filt.nodup.srt.SE-ENCFF000SAX.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
11.4 MB
ENCFF000SAY.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
ENCFF000SAY.raw.srt.filt.nodup.srt.SE-ENCFF000SAX.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
5.87 MB
ENCFF000SAX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.27 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2.12 MB
R2.fixcoord.regionPeak.gz
bed narrowPeak
5.11 MB
r2.pvalue_signal.bw
bigWig
482 MB
r1.pvalue_signal.bw
bigWig
489 MB
R1.fixcoord.regionPeak.gz
bed narrowPeak
5.15 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
2.11 MB
r1.fc_signal.bw
bigWig
498 MB
pool.pvalue_signal.bw
bigWig
482 MB
r2.fc_signal.bw
bigWig
480 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
11.2 MB
PL.regionPeak.gz
bed narrowPeak
5.87 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
11.1 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1.27 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
11.4 MB
pool.fc_signal.bw
bigWig
786 MB
ENCFF000SAY.crop_36-2bp.bam
bam
1.58 GB
ENCFF000SAY.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
463 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.16 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.81 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
2.14 MB
ENCFF000SAX.crop_36-2bp.bam
bam
1.47 GB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.2 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.18 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.03 MB
ENCFF000SAY.crop_36-2bp.nodup.bam
bam
1.05 GB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.29 MB
ENCFF000SAY.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
523 MB
ENCFF000SAX.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
588 MB
ENCFF000SAX.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
504 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
659 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
834 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
877 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.14 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1.15 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.56 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.94 MB