Transcription Factor
CTCF
Cell Line
MCF-7
Description
CTCF ChIP-seq on human MCF-7 treated with serum stimulated media
ENCODE Link
ENCSR000DMO

Files (64)

File Type Size Actions
wgEncodeOpenChromChipMcf7CtcfSerumstimRawDataRep1.fastq.gz
fastq
1.13 GB
wgEncodeOpenChromChipMcf7CtcfSerumstimRawDataRep2.fastq.gz
fastq
1.13 GB
ENCFF000SAL.crop_36-2bp.bam
bam
1.25 GB
ENCFF000SAL.crop_36-2bp.nodup.bam
bam
515 MB
ENCFF000SAL.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
219 MB
ENCFF000SAK.raw.srt.bam
bam
1.36 GB
ENCFF000SAK.raw.srt.filt.nodup.srt.bam
bam
654 MB
ENCFF000SAL.raw.srt.filt.nodup.srt.bam
bam
457 MB
ENCFF000SAL.raw.srt.bam
bam
1.29 GB
ENCFF000SAK.raw.srt.bam
bam
1.36 GB
ENCFF000SAK.raw.srt.filt.nodup.srt.bam
bam
654 MB
ENCFF000SAL.raw.srt.bam
bam
1.29 GB
ENCFF000SAL.raw.srt.filt.nodup.srt.bam
bam
457 MB
r2.pvalue_signal.bw
bigWig
386 MB
r1.pvalue_signal.bw
bigWig
467 MB
pool.pvalue_signal.bw
bigWig
468 MB
pool.fc_signal.bw
bigWig
393 MB
r1.fc_signal.bw
bigWig
270 MB
r2.fc_signal.bw
bigWig
205 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
952 KB
ENCFF000SAK.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.25 MB
ENCFF000SAL.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
4.7 MB
ENCFF000SAK.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.6 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1010 KB
ENCFF000SAL.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
ENCFF000SAK.raw.srt.filt.nodup.srt.SE-ENCFF000SAL.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
5.87 MB
ENCFF000SAK.raw.srt.filt.nodup.srt.SE-ENCFF000SAL.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.9 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.68 MB
r1.pvalue_signal.bw
bigWig
394 MB
R2.regionPeak.gz
bed narrowPeak
4.7 MB
R1.regionPeak.gz
bed narrowPeak
5.25 MB
R1.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
951 KB
r2.fc_signal.bw
bigWig
204 MB
pool.fc_signal.bw
bigWig
388 MB
PL.fixcoord.regionPeak.gz
bed narrowPeak
5.87 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
1.6 MB
r1.fc_signal.bw
bigWig
271 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
1.68 MB
r2.pvalue_signal.bw
bigWig
381 MB
pool.pvalue_signal.bw
bigWig
473 MB
R2.fixcoord.regionPeak.bb
bigBed narrowPeak
10.4 MB
PL.fixcoord.regionPeak.bb
bigBed narrowPeak
10.9 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
1010 KB
ENCFF000SAK.crop_36-2bp.bam
bam
1.31 GB
ENCFF000SAK.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
501 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
1010 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.35 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.61 MB
ENCFF000SAK.crop_36-2bp.nodup.bam
bam
740 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
626 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
768 KB
ENCFF000SAK.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
307 MB
ENCFF000SAL.crop_36-2bp.nodup_x_ENCFF000SAZ.crop_36-2bp.nodup.pval.signal.bigwig
bigWig
385 MB
rep.pooled_x_ENCFF000SAZ.crop_36-2bp.nodup.fc.signal.bigwig
bigWig
429 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
5.63 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.53 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
951 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.68 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
1.46 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
854 KB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.53 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
6.48 MB