ENCODE Experiment ENCSR000CFJ

Transcription Factor
CTCF
Cell Line
bone marrow macrophage
Description
CTCF ChIP-seq on 8-week mouse BMDM
ENCODE Link
ENCSR000CFJ

Files (44)

File Type Size Actions
wgEncodeLicrTfbsBmdmCtcfFAdult8wksC57bl6StdRawDataRep1.fastq.gz
fastq
967 MB
wgEncodeLicrTfbsBmdmCtcfFAdult8wksC57bl6StdRawDataRep2.fastq.gz
fastq
1.17 GB
ENCFF001LGV.raw.srt.bam
bam
1.03 GB
ENCFF001LGW.raw.srt.bam
bam
1.27 GB
ENCFF001LGV.raw.srt.filt.nodup.srt.bam
bam
581 MB
ENCFF001LGW.raw.srt.filt.nodup.srt.bam
bam
744 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
531 MB
ENCFF001LGV.crop_36-2bp.bam
bam
1.01 GB
ENCFF001LGW.crop_36-2bp.bam
bam
1.25 GB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
448 MB
ENCFF001LGV.crop_36-2bp.nodup.bam
bam
619 MB
ENCFF001LGV.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
303 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.84 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
291 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.97 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
349 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
328 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
516 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
414 KB
r1.pvalue_signal.bw
bigWig
301 MB
r2.pvalue_signal.bw
bigWig
392 MB
r2.fc_signal.bw
bigWig
353 MB
pool.fc_signal.bw
bigWig
509 MB
ENCFF001LGV.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
12.3 MB
ENCFF001LGV.raw.srt.filt.nodup.srt.SE-ENCFF001LGW.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
12.4 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
560 KB
r1.fc_signal.bw
bigWig
289 MB
ENCFF001LGV.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
5.21 MB
ENCFF001LGW.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
5.64 MB
ENCFF001LGV.raw.srt.filt.nodup.srt.SE-ENCFF001LGW.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
6.33 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
316 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
336 KB
pool.pvalue_signal.bw
bigWig
493 MB
ENCFF001LGW.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
12.3 MB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
585 KB
ENCFF001LGW.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
365 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.34 MB
ENCFF001LGW.crop_36-2bp.nodup.bam
bam
792 MB
ENCFF001LGV.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
347 MB
ENCFF001LGW.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
424 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
223 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.93 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
601 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
573 KB