Transcription Factor
CTCF
Cell Line
testis
Description
CTCF ChIP-seq on 8-week mouse testis
ENCODE Link
ENCSR000CEF

Files (44)

File Type Size Actions
wgEncodeLicrTfbsTestisCtcfMAdult8wksC57bl6StdRawDataRep2.fastq.gz
fastq
398 MB
wgEncodeLicrTfbsTestisCtcfMAdult8wksC57bl6StdRawDataRep1.fastq.gz
fastq
785 MB
ENCFF001LRX.raw.srt.bam
bam
868 MB
ENCFF001LRW.raw.srt.bam
bam
431 MB
ENCFF001LRX.raw.srt.filt.nodup.srt.bam
bam
500 MB
ENCFF001LRW.raw.srt.filt.nodup.srt.bam
bam
215 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
249 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.51 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
177 KB
pool.fc_signal.bw
bigWig
236 MB
ENCFF001LRX.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
3.93 MB
ENCFF001LRW.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
3.75 MB
ENCFF001LRX.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
9.52 MB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
319 KB
r2.pvalue_signal.bw
bigWig
162 MB
ENCFF001LRX.raw.srt.filt.nodup.srt.SE-ENCFF001LRW.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10 MB
pool.pvalue_signal.bw
bigWig
200 MB
r2.fc_signal.bw
bigWig
102 MB
r1.pvalue_signal.bw
bigWig
189 MB
r1.fc_signal.bw
bigWig
164 MB
ENCFF001LRX.raw.srt.filt.nodup.srt.SE-ENCFF001LRW.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.3 MB
ENCFF001LRW.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
8.87 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
173 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
387 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
721 KB
ENCFF001LRW.crop_36-2bp.bam
bam
425 MB
ENCFF001LRW.crop_36-2bp.nodup.bam
bam
229 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
736 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
326 KB
ENCFF001LRX.crop_36-2bp.bam
bam
862 MB
ENCFF001LRX.crop_36-2bp.nodup.bam
bam
528 MB
ENCFF001LRX.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
169 MB
ENCFF001LRW.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
109 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.03 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.08 MB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
79.3 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.88 MB
ENCFF001LRX.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
177 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
305 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
395 KB
ENCFF001LRW.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
174 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
381 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
746 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
169 KB