ENCODE Experiment ENCSR000CED

Transcription Factor
CTCF
Cell Line
small intestine
Description
CTCF ChIP-seq on 8-week mouse small intestine
ENCODE Link
ENCSR000CED

Files (44)

File Type Size Actions
wgEncodeLicrTfbsSmintCtcfMAdult8wksC57bl6StdRawDataRep1V2.fastq.gz
fastq
340 MB
wgEncodeLicrTfbsSmintCtcfMAdult8wksC57bl6StdRawDataRep2.fastq.gz
fastq
1.38 GB
ENCFF001LQH.raw.srt.bam
bam
366 MB
ENCFF001LQI.raw.srt.bam
bam
1.5 GB
ENCFF001LQH.raw.srt.filt.nodup.srt.bam
bam
139 MB
ENCFF001LQI.raw.srt.filt.nodup.srt.bam
bam
891 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
495 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
357 KB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.54 MB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
853 KB
r1.pvalue_signal.bw
bigWig
222 MB
pool.pvalue_signal.bw
bigWig
553 MB
r2.pvalue_signal.bw
bigWig
558 MB
r2.fc_signal.bw
bigWig
445 MB
r1.fc_signal.bw
bigWig
75 MB
pool.fc_signal.bw
bigWig
507 MB
ENCFF001LQH.raw.srt.filt.nodup.srt.SE.regionPeak.gz
bed narrowPeak
1010 KB
ENCFF001LQH.raw.srt.filt.nodup.srt.SE-ENCFF001LQI.raw.srt.filt.nodup.srt.SE_pooled.regionPeak.gz
bed narrowPeak
5.95 MB
ENCFF001LQI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
5.93 MB
ENCFF001LQH.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
2.27 MB
ENCFF001LQI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
12.7 MB
ENCFF001LQH.raw.srt.filt.nodup.srt.SE-ENCFF001LQI.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
12.7 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
198 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
449 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
844 KB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
476 KB
ENCFF001LQI.crop_30-2bp.nodup.bam
bam
806 MB
ENCFF001LQH.crop_30-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
106 MB
ENCFF001LQI.crop_30-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
446 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
547 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
4.57 MB
ENCFF001LQH.crop_30-2bp.bam
bam
355 MB
ENCFF001LQI.crop_30-2bp.bam
bam
1.33 GB
ENCFF001LQH.crop_30-2bp.nodup.bam
bam
146 MB
ENCFF001LQH.crop_30-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
419 MB
ENCFF001LQI.crop_30-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
559 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
65.2 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
469 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
483 KB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
1.34 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
166 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
834 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
207 KB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
463 KB