ENCODE Experiment ENCSR000CBL

Transcription Factor
CTCF
Cell Line
bone marrow
Description
CTCF ChIP-seq on 8-week mouse bone marrow
ENCODE Link
ENCSR000CBL

Files (44)

File Type Size Actions
wgEncodeLicrTfbsBmarrowCtcfMAdult8wksC57bl6StdRawDataRep2.fastq.gz
fastq
707 MB
wgEncodeLicrTfbsBmarrowCtcfMAdult8wksC57bl6StdRawDataRep1.fastq.gz
fastq
1.35 GB
ENCFF001LGH.raw.srt.bam
bam
786 MB
ENCFF001LGI.raw.srt.bam
bam
1.53 GB
ENCFF001LGH.raw.srt.filt.nodup.srt.bam
bam
382 MB
ENCFF001LGI.raw.srt.filt.nodup.srt.bam
bam
931 MB
r1.pvalue_signal.bw
bigWig
347 MB
pool.pvalue_signal.bw
bigWig
338 MB
ENCFF001LGH.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
2.41 MB
r2.fc_signal.bw
bigWig
120 MB
pool.fc_signal.bw
bigWig
428 MB
ENCFF001LGI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.gz
bed narrowPeak
4.35 MB
r2.pvalue_signal.bw
bigWig
149 MB
r1.fc_signal.bw
bigWig
336 MB
ENCFF001LGH.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
5.13 MB
IDR_final_conservative.narrowPeak.gz
bed narrowPeak
394 KB
IDR_final_conservative.narrowPeak.bb
bigBed narrowPeak
754 KB
ENCFF001LGI.raw.srt.filt.nodup.srt.SE-ENCFF001LGH.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.gz
bed narrowPeak
4.74 MB
ENCFF001LGI.raw.srt.filt.nodup.srt.SE-ENCFF001LGH.raw.srt.filt.nodup.srt.SE_pooled.fixcoord.regionPeak.bb
bigBed narrowPeak
10.7 MB
IDR_final_optimal.narrowPeak.gz
bed narrowPeak
439 KB
IDR_final_optimal.narrowPeak.bb
bigBed narrowPeak
818 KB
ENCFF001LGI.raw.srt.filt.nodup.srt.SE.fixcoord.regionPeak.bb
bigBed narrowPeak
10.2 MB
rep1_vs_rep2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
2.31 MB
rep.pooled_x_ctl.pooled.fc.signal.bigwig
bigWig
451 MB
rep1-pr1_vs_rep1-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.22 MB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
733 KB
rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
395 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
439 KB
ENCFF001LGH.crop_36-2bp.bam
bam
775 MB
ENCFF001LGH.crop_36-2bp.nodup.bam
bam
407 MB
ENCFF001LGI.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
345 MB
ENCFF001LGI.crop_36-2bp.bam
bam
1.52 GB
ENCFF001LGH.crop_36-2bp.nodup_x_ctl.pooled.fc.signal.bigwig
bigWig
161 MB
rep.pooled_x_ctl.pooled.pval.signal.bigwig
bigWig
413 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
753 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
227 KB
ENCFF001LGI.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
350 MB
rep2-pr1_vs_rep2-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
930 KB
rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
388 KB
ENCFF001LGI.crop_36-2bp.nodup.bam
bam
993 MB
ENCFF001LGH.crop_36-2bp.nodup_x_ctl.pooled.pval.signal.bigwig
bigWig
287 MB
pooled-pr1_vs_pooled-pr2.idr0.05.unthresholded-peaks.txt.gz
bed idr_ranked_peak
3.43 MB
rep1_vs_rep2.idr0.05.bfilt.regionPeak.gz
bed narrowPeak
394 KB
pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb
bigBed narrowPeak
816 KB